Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.69■□□□□ 0.1
SEC61A1P61619 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.69■□□□□ 0.1
SEC61A1P61619 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.69■□□□□ 0.1
SEC61A1P61619 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SEC61A1P61619 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.69■□□□□ 0.1
SEC61A1P61619 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SEC61A1P61619 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SEC61A1P61619 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 HEIH-201ENST00000623091 1652 ntBASIC15.68■□□□□ 0.1
SEC61A1P61619 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 AC009947.2-201ENST00000444014 672 ntBASIC15.68■□□□□ 0.1
SEC61A1P61619 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 AC022616.7-201ENST00000525383 220 ntBASIC15.68■□□□□ 0.1
SEC61A1P61619 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.68■□□□□ 0.1
SEC61A1P61619 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.68■□□□□ 0.1
SEC61A1P61619 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 AC011558.1-201ENST00000623459 338 ntBASIC15.68■□□□□ 0.1
SEC61A1P61619 AC008894.3-201ENST00000624324 3103 ntBASIC15.68■□□□□ 0.1
SEC61A1P61619 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 AL118508.1-201ENST00000613502 2345 ntBASIC15.68■□□□□ 0.1
SEC61A1P61619 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.68■□□□□ 0.1
SEC61A1P61619 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 NKILA-202ENST00000614771 2598 ntBASIC15.68■□□□□ 0.1
SEC61A1P61619 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SEC61A1P61619 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEC61A1P61619 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SEC61A1P61619 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SEC61A1P61619 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.67■□□□□ 0.1
SEC61A1P61619 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.67■□□□□ 0.1
SEC61A1P61619 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SEC61A1P61619 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.67■□□□□ 0.1
SEC61A1P61619 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.67■□□□□ 0.1
SEC61A1P61619 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.67■□□□□ 0.1
SEC61A1P61619 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SEC61A1P61619 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.67■□□□□ 0.1
SEC61A1P61619 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms