Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS3AP61247 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS3AP61247 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS3AP61247 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.8■□□□□ 0.28
RPS3AP61247 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RPS3AP61247 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RPS3AP61247 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RPS3AP61247 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RPS3AP61247 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.8■□□□□ 0.28
RPS3AP61247 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.8■□□□□ 0.28
RPS3AP61247 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS3AP61247 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RPS3AP61247 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS3AP61247 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RPS3AP61247 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS3AP61247 HOMER2P1-201ENST00000455653 964 ntBASIC16.79■□□□□ 0.28
RPS3AP61247 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS3AP61247 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS3AP61247 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS3AP61247 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.79■□□□□ 0.28
RPS3AP61247 AL023973.1-201ENST00000624619 620 ntBASIC16.79■□□□□ 0.28
RPS3AP61247 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RPS3AP61247 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS3AP61247 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RPS3AP61247 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS3AP61247 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS3AP61247 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RPS3AP61247 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RPS3AP61247 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.79■□□□□ 0.28
RPS3AP61247 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS3AP61247 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS3AP61247 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS3AP61247 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 AC011676.5-201ENST00000624864 2660 ntBASIC16.78■□□□□ 0.28
RPS3AP61247 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RPS3AP61247 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS3AP61247 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS3AP61247 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.78■□□□□ 0.28
RPS3AP61247 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.78■□□□□ 0.28
RPS3AP61247 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.78■□□□□ 0.28
RPS3AP61247 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS3AP61247 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.78■□□□□ 0.28
RPS3AP61247 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.78■□□□□ 0.28
RPS3AP61247 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 AC011558.1-201ENST00000623459 338 ntBASIC16.78■□□□□ 0.28
RPS3AP61247 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
RPS3AP61247 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 AC103702.1-201ENST00000548801 2630 ntBASIC16.78■□□□□ 0.28
RPS3AP61247 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.78■□□□□ 0.28
RPS3AP61247 KRT8P7-201ENST00000533003 1432 ntBASIC16.78■□□□□ 0.28
RPS3AP61247 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RPS3AP61247 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms