Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.12■□□□□ 0.65
RAD23BP54727 NPAP1P7-201ENST00000613027 823 ntBASIC19.12■□□□□ 0.65
RAD23BP54727 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.12■□□□□ 0.65
RAD23BP54727 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RAD23BP54727 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RAD23BP54727 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.11■□□□□ 0.65
RAD23BP54727 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RAD23BP54727 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.11■□□□□ 0.65
RAD23BP54727 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.11■□□□□ 0.65
RAD23BP54727 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.11■□□□□ 0.65
RAD23BP54727 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.11■□□□□ 0.65
RAD23BP54727 AL353801.3-201ENST00000609898 542 ntBASIC19.11■□□□□ 0.65
RAD23BP54727 AC008764.6-201ENST00000595909 2069 ntBASIC19.11■□□□□ 0.65
RAD23BP54727 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.11■□□□□ 0.65
RAD23BP54727 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RAD23BP54727 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
RAD23BP54727 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAD23BP54727 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.1■□□□□ 0.65
RAD23BP54727 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
RAD23BP54727 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.1■□□□□ 0.65
RAD23BP54727 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.1■□□□□ 0.65
RAD23BP54727 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.1■□□□□ 0.65
RAD23BP54727 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.1■□□□□ 0.65
RAD23BP54727 UPK3BP1-201ENST00000428678 509 ntBASIC19.1■□□□□ 0.65
RAD23BP54727 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.1■□□□□ 0.65
RAD23BP54727 MIR3180-1-201ENST00000580374 94 ntBASIC19.1■□□□□ 0.65
RAD23BP54727 MIR3180-3-201ENST00000584616 94 ntBASIC19.1■□□□□ 0.65
RAD23BP54727 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.1■□□□□ 0.65
RAD23BP54727 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RAD23BP54727 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RAD23BP54727 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RAD23BP54727 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
RAD23BP54727 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RAD23BP54727 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.1■□□□□ 0.65
RAD23BP54727 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAD23BP54727 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.09■□□□□ 0.65
RAD23BP54727 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.09■□□□□ 0.65
RAD23BP54727 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
RAD23BP54727 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.09■□□□□ 0.65
RAD23BP54727 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.09■□□□□ 0.65
RAD23BP54727 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.09■□□□□ 0.65
RAD23BP54727 AP002414.4-201ENST00000589764 1148 ntBASIC19.09■□□□□ 0.65
RAD23BP54727 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.09■□□□□ 0.65
RAD23BP54727 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RAD23BP54727 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RAD23BP54727 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.09■□□□□ 0.65
RAD23BP54727 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAD23BP54727 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAD23BP54727 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms