Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.64■□□□□ 0.41
LIMK1P53667 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.64■□□□□ 0.41
LIMK1P53667 MIR1199-201ENST00000621445 119 ntBASIC17.64■□□□□ 0.41
LIMK1P53667 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.64■□□□□ 0.41
LIMK1P53667 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK1P53667 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK1P53667 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK1P53667 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.64■□□□□ 0.41
LIMK1P53667 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LIMK1P53667 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.64■□□□□ 0.41
LIMK1P53667 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LIMK1P53667 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.64■□□□□ 0.41
LIMK1P53667 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LIMK1P53667 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 AL357033.4-201ENST00000617703 1807 ntBASIC17.63■□□□□ 0.41
LIMK1P53667 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.63■□□□□ 0.41
LIMK1P53667 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.63■□□□□ 0.41
LIMK1P53667 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.63■□□□□ 0.41
LIMK1P53667 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.63■□□□□ 0.41
LIMK1P53667 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LIMK1P53667 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.63■□□□□ 0.41
LIMK1P53667 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.63■□□□□ 0.41
LIMK1P53667 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.63■□□□□ 0.41
LIMK1P53667 AC009154.2-201ENST00000621177 724 ntBASIC17.63■□□□□ 0.41
LIMK1P53667 C20orf181-201ENST00000623918 480 ntBASIC17.63■□□□□ 0.41
LIMK1P53667 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 TEX21P-204ENST00000641479 1693 ntBASIC17.63■□□□□ 0.41
LIMK1P53667 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.63■□□□□ 0.41
LIMK1P53667 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LIMK1P53667 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LIMK1P53667 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LIMK1P53667 AP000997.3-201ENST00000623333 2250 ntBASIC17.63■□□□□ 0.41
LIMK1P53667 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.62■□□□□ 0.41
LIMK1P53667 PCDHB18P-201ENST00000524813 2368 ntBASIC17.62■□□□□ 0.41
LIMK1P53667 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.62■□□□□ 0.41
LIMK1P53667 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LIMK1P53667 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.62■□□□□ 0.41
LIMK1P53667 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.62■□□□□ 0.41
LIMK1P53667 MKNK2P1-201ENST00000437526 628 ntBASIC17.62■□□□□ 0.41
LIMK1P53667 MTCL1P1-201ENST00000446207 792 ntBASIC17.62■□□□□ 0.41
LIMK1P53667 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.62■□□□□ 0.41
LIMK1P53667 AC005593.1-201ENST00000624894 515 ntBASIC17.62■□□□□ 0.41
LIMK1P53667 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LIMK1P53667 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.62■□□□□ 0.41
LIMK1P53667 AL163051.1-201ENST00000569214 1512 ntBASIC17.62■□□□□ 0.41
LIMK1P53667 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LIMK1P53667 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.62■□□□□ 0.41
LIMK1P53667 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LIMK1P53667 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.61■□□□□ 0.41
LIMK1P53667 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LIMK1P53667 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK1P53667 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.61■□□□□ 0.41
LIMK1P53667 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
LIMK1P53667 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.61■□□□□ 0.41
LIMK1P53667 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK1P53667 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK1P53667 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK1P53667 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LIMK1P53667 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LIMK1P53667 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms