Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.74■□□□□ 0.59
CLCN4P51793 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN4P51793 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CLCN4P51793 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.74■□□□□ 0.59
CLCN4P51793 AC004967.1-201ENST00000453589 447 ntBASIC18.74■□□□□ 0.59
CLCN4P51793 AC005593.1-201ENST00000624894 515 ntBASIC18.74■□□□□ 0.59
CLCN4P51793 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CLCN4P51793 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CLCN4P51793 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLCN4P51793 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCN4P51793 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 AC023274.1-201ENST00000418278 595 ntBASIC18.73■□□□□ 0.59
CLCN4P51793 RPS8P6-201ENST00000426177 609 ntBASIC18.73■□□□□ 0.59
CLCN4P51793 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCN4P51793 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.73■□□□□ 0.59
CLCN4P51793 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLCN4P51793 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLCN4P51793 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLCN4P51793 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.73■□□□□ 0.59
CLCN4P51793 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN4P51793 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CLCN4P51793 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.72■□□□□ 0.59
CLCN4P51793 PMS2P2-201ENST00000425039 1128 ntBASIC18.72■□□□□ 0.59
CLCN4P51793 AC103564.2-201ENST00000432853 1299 ntBASIC18.72■□□□□ 0.59
CLCN4P51793 AC136632.2-201ENST00000512891 861 ntBASIC18.72■□□□□ 0.59
CLCN4P51793 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
CLCN4P51793 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 AC064836.3-201ENST00000607928 673 ntBASIC18.72■□□□□ 0.59
CLCN4P51793 AC134684.3-201ENST00000641758 218 ntBASIC18.72■□□□□ 0.59
CLCN4P51793 AC079781.4-201ENST00000641908 219 ntBASIC18.72■□□□□ 0.59
CLCN4P51793 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN4P51793 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLCN4P51793 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.72■□□□□ 0.59
CLCN4P51793 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLCN4P51793 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 AC093010.1-201ENST00000473625 1624 ntBASIC18.71■□□□□ 0.59
CLCN4P51793 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
CLCN4P51793 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN4P51793 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.71■□□□□ 0.59
CLCN4P51793 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLCN4P51793 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLCN4P51793 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLCN4P51793 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.71■□□□□ 0.59
CLCN4P51793 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.71■□□□□ 0.59
CLCN4P51793 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLCN4P51793 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms