Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF144AP50876 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF144AP50876 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF144AP50876 FLJ13224-201ENST00000313737 1514 ntBASIC16.65■□□□□ 0.26
RNF144AP50876 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF144AP50876 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.64■□□□□ 0.26
RNF144AP50876 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF144AP50876 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RNF144AP50876 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF144AP50876 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF144AP50876 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF144AP50876 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF144AP50876 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
RNF144AP50876 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF144AP50876 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF144AP50876 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 STARP1-201ENST00000397973 869 ntBASIC16.64■□□□□ 0.25
RNF144AP50876 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RNF144AP50876 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.64■□□□□ 0.25
RNF144AP50876 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RNF144AP50876 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF144AP50876 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RNF144AP50876 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF144AP50876 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF144AP50876 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF144AP50876 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF144AP50876 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RNF144AP50876 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF144AP50876 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF144AP50876 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF144AP50876 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 LINC00167-201ENST00000530583 1419 ntBASIC16.63■□□□□ 0.25
RNF144AP50876 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RNF144AP50876 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF144AP50876 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF144AP50876 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF144AP50876 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RNF144AP50876 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RNF144AP50876 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF144AP50876 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF144AP50876 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF144AP50876 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF144AP50876 AC022616.7-201ENST00000525383 220 ntBASIC16.63■□□□□ 0.25
RNF144AP50876 AC024563.2-201ENST00000603282 481 ntBASIC16.63■□□□□ 0.25
RNF144AP50876 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.63■□□□□ 0.25
RNF144AP50876 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RNF144AP50876 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF144AP50876 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF144AP50876 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 LINC00896-202ENST00000609602 2128 ntBASIC16.63■□□□□ 0.25
RNF144AP50876 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF144AP50876 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 LINC01311-201ENST00000565162 1445 ntBASIC16.62■□□□□ 0.25
RNF144AP50876 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
RNF144AP50876 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF144AP50876 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF144AP50876 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF144AP50876 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms