Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRCC3P46736 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRCC3P46736 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BRCC3P46736 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.97■□□□□ 0.63
BRCC3P46736 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 AC122714.2-201ENST00000502787 707 ntBASIC18.97■□□□□ 0.63
BRCC3P46736 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 AL671883.3-201ENST00000603274 991 ntBASIC18.97■□□□□ 0.63
BRCC3P46736 AC025062.2-201ENST00000605477 670 ntBASIC18.97■□□□□ 0.63
BRCC3P46736 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BRCC3P46736 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BRCC3P46736 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BRCC3P46736 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRCC3P46736 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.97■□□□□ 0.63
BRCC3P46736 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.96■□□□□ 0.63
BRCC3P46736 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
BRCC3P46736 COX5BP2-201ENST00000392354 334 ntBASIC18.96■□□□□ 0.63
BRCC3P46736 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 BX005266.1-201ENST00000473402 457 ntBASIC18.96■□□□□ 0.63
BRCC3P46736 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 AC093909.1-201ENST00000504731 1122 ntBASIC18.96■□□□□ 0.63
BRCC3P46736 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.96■□□□□ 0.63
BRCC3P46736 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
BRCC3P46736 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BRCC3P46736 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.96■□□□□ 0.63
BRCC3P46736 AD001527.2-201ENST00000622994 785 ntBASIC18.96■□□□□ 0.63
BRCC3P46736 AL139288.1-201ENST00000623748 933 ntBASIC18.96■□□□□ 0.63
BRCC3P46736 AC116407.3-201ENST00000623905 1129 ntBASIC18.96■□□□□ 0.63
BRCC3P46736 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.96■□□□□ 0.63
BRCC3P46736 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
BRCC3P46736 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
BRCC3P46736 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.96■□□□□ 0.63
BRCC3P46736 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BRCC3P46736 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BRCC3P46736 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BRCC3P46736 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
BRCC3P46736 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCC3P46736 PMPCAP1-201ENST00000508114 1576 ntBASIC18.95■□□□□ 0.62
BRCC3P46736 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
BRCC3P46736 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BRCC3P46736 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BRCC3P46736 AC139887.3-201ENST00000568585 713 ntBASIC18.95■□□□□ 0.62
BRCC3P46736 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.95■□□□□ 0.62
BRCC3P46736 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCC3P46736 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 AC004817.3-201ENST00000602957 2129 ntBASIC18.95■□□□□ 0.62
BRCC3P46736 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
BRCC3P46736 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCC3P46736 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
BRCC3P46736 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCC3P46736 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BRCC3P46736 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.95■□□□□ 0.62
BRCC3P46736 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
BRCC3P46736 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BRCC3P46736 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms