Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTTP42858 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.95■□□□□ 0.78
HTTP42858 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTTP42858 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTTP42858 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.95■□□□□ 0.78
HTTP42858 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HTTP42858 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
HTTP42858 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.95■□□□□ 0.78
HTTP42858 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.95■□□□□ 0.78
HTTP42858 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.95■□□□□ 0.78
HTTP42858 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.95■□□□□ 0.78
HTTP42858 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
HTTP42858 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
HTTP42858 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.94■□□□□ 0.78
HTTP42858 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.94■□□□□ 0.78
HTTP42858 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.94■□□□□ 0.78
HTTP42858 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.94■□□□□ 0.78
HTTP42858 ARSEP1-201ENST00000420443 635 ntBASIC19.94■□□□□ 0.78
HTTP42858 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.94■□□□□ 0.78
HTTP42858 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.94■□□□□ 0.78
HTTP42858 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HTTP42858 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
HTTP42858 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.94■□□□□ 0.78
HTTP42858 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HTTP42858 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.94■□□□□ 0.78
HTTP42858 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 AC074386.1-202ENST00000463561 864 ntBASIC19.93■□□□□ 0.78
HTTP42858 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.93■□□□□ 0.78
HTTP42858 REXO1L3P-201ENST00000622202 1288 ntBASIC19.93■□□□□ 0.78
HTTP42858 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.93■□□□□ 0.78
HTTP42858 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.93■□□□□ 0.78
HTTP42858 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.93■□□□□ 0.78
HTTP42858 MRPS18AP1-201ENST00000414458 589 ntBASIC19.93■□□□□ 0.78
HTTP42858 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.93■□□□□ 0.78
HTTP42858 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.93■□□□□ 0.78
HTTP42858 AL512356.2-201ENST00000546955 174 ntBASIC19.93■□□□□ 0.78
HTTP42858 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.93■□□□□ 0.78
HTTP42858 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.93■□□□□ 0.78
HTTP42858 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.93■□□□□ 0.78
HTTP42858 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.93■□□□□ 0.78
HTTP42858 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HTTP42858 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
HTTP42858 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HTTP42858 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.93■□□□□ 0.78
HTTP42858 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 CNN2P2-201ENST00000443536 909 ntBASIC19.93■□□□□ 0.78
HTTP42858 CNN2P3-201ENST00000450201 906 ntBASIC19.93■□□□□ 0.78
HTTP42858 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.93■□□□□ 0.78
HTTP42858 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.93■□□□□ 0.78
HTTP42858 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.93■□□□□ 0.78
HTTP42858 AL136317.3-201ENST00000618497 906 ntBASIC19.93■□□□□ 0.78
HTTP42858 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.93■□□□□ 0.78
HTTP42858 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HTTP42858 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HTTP42858 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HTTP42858 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTTP42858 FO538757.1-201ENST00000623083 1397 ntBASIC19.92■□□□□ 0.78
HTTP42858 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTTP42858 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTTP42858 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HTTP42858 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.92■□□□□ 0.78
HTTP42858 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.92■□□□□ 0.78
HTTP42858 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTTP42858 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HTTP42858 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTTP42858 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.92■□□□□ 0.78
HTTP42858 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.92■□□□□ 0.78
HTTP42858 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HTTP42858 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HTTP42858 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTTP42858 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HTTP42858 AC122714.2-201ENST00000502787 707 ntBASIC19.92■□□□□ 0.78
HTTP42858 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.92■□□□□ 0.78
HTTP42858 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTTP42858 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.91■□□□□ 0.78
HTTP42858 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.91■□□□□ 0.78
HTTP42858 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HTTP42858 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HTTP42858 ESPNP-201ENST00000270691 2015 ntBASIC19.91■□□□□ 0.78
HTTP42858 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.91■□□□□ 0.78
HTTP42858 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.91■□□□□ 0.78
HTTP42858 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms