Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.96■□□□□ 0.47
LSP1P33241 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.96■□□□□ 0.47
LSP1P33241 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.96■□□□□ 0.47
LSP1P33241 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.96■□□□□ 0.47
LSP1P33241 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSP1P33241 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
LSP1P33241 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LSP1P33241 AC092850.2-201ENST00000623821 2697 ntBASIC17.95■□□□□ 0.46
LSP1P33241 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
LSP1P33241 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.95■□□□□ 0.46
LSP1P33241 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.95■□□□□ 0.46
LSP1P33241 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LSP1P33241 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.95■□□□□ 0.46
LSP1P33241 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
LSP1P33241 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LSP1P33241 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.95■□□□□ 0.46
LSP1P33241 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LSP1P33241 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.94■□□□□ 0.46
LSP1P33241 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.94■□□□□ 0.46
LSP1P33241 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LSP1P33241 AC022188.1-201ENST00000620960 1664 ntBASIC17.94■□□□□ 0.46
LSP1P33241 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LSP1P33241 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 CDCA4P2-201ENST00000441182 718 ntBASIC17.94■□□□□ 0.46
LSP1P33241 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.94■□□□□ 0.46
LSP1P33241 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.94■□□□□ 0.46
LSP1P33241 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.94■□□□□ 0.46
LSP1P33241 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 AC092368.3-202ENST00000574180 1591 ntBASIC17.94■□□□□ 0.46
LSP1P33241 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LSP1P33241 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.94■□□□□ 0.46
LSP1P33241 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.94■□□□□ 0.46
LSP1P33241 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSP1P33241 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSP1P33241 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.94■□□□□ 0.46
LSP1P33241 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSP1P33241 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LSP1P33241 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.94■□□□□ 0.46
LSP1P33241 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.94■□□□□ 0.46
LSP1P33241 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LSP1P33241 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.93■□□□□ 0.46
LSP1P33241 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 AL163051.1-201ENST00000569214 1512 ntBASIC17.93■□□□□ 0.46
LSP1P33241 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.93■□□□□ 0.46
LSP1P33241 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LSP1P33241 MIR149-201ENST00000384879 89 ntBASIC17.93■□□□□ 0.46
LSP1P33241 MIR663A-201ENST00000385250 93 ntBASIC17.93■□□□□ 0.46
LSP1P33241 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LSP1P33241 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.93■□□□□ 0.46
LSP1P33241 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.93■□□□□ 0.46
LSP1P33241 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.93■□□□□ 0.46
LSP1P33241 DUTP2-201ENST00000519164 463 ntBASIC17.93■□□□□ 0.46
LSP1P33241 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LSP1P33241 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms