Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC8P31273 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXC8P31273 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.39■□□□□ 0.7
HOXC8P31273 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.39■□□□□ 0.7
HOXC8P31273 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.39■□□□□ 0.7
HOXC8P31273 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HOXC8P31273 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HOXC8P31273 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXC8P31273 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HOXC8P31273 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC8P31273 AC002558.1-201ENST00000488906 803 ntBASIC19.39■□□□□ 0.69
HOXC8P31273 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXC8P31273 MIR3687-2-201ENST00000577708 61 ntBASIC19.39■□□□□ 0.69
HOXC8P31273 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC8P31273 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.39■□□□□ 0.69
HOXC8P31273 MIR3687-1-201ENST00000614492 61 ntBASIC19.39■□□□□ 0.69
HOXC8P31273 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HOXC8P31273 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXC8P31273 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXC8P31273 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXC8P31273 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC8P31273 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HOXC8P31273 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXC8P31273 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXC8P31273 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC8P31273 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC8P31273 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HOXC8P31273 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC8P31273 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
HOXC8P31273 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC8P31273 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
HOXC8P31273 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC8P31273 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC8P31273 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HOXC8P31273 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC8P31273 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC8P31273 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC8P31273 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC8P31273 VN2R19P-201ENST00000442399 1052 ntBASIC19.38■□□□□ 0.69
HOXC8P31273 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC8P31273 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC8P31273 YBX1P5-201ENST00000509441 847 ntBASIC19.38■□□□□ 0.69
HOXC8P31273 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC8P31273 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC8P31273 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HOXC8P31273 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC8P31273 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC8P31273 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
HOXC8P31273 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.38■□□□□ 0.69
HOXC8P31273 AC009336.1-201ENST00000608941 1553 ntBASIC19.38■□□□□ 0.69
HOXC8P31273 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXC8P31273 AC134684.3-201ENST00000641758 218 ntBASIC19.38■□□□□ 0.69
HOXC8P31273 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXC8P31273 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXC8P31273 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.37■□□□□ 0.69
HOXC8P31273 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC8P31273 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HOXC8P31273 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
HOXC8P31273 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC8P31273 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC8P31273 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
HOXC8P31273 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC8P31273 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 GPR89P-201ENST00000407924 1495 ntBASIC19.37■□□□□ 0.69
HOXC8P31273 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HOXC8P31273 AC002310.6-201ENST00000624451 1377 ntBASIC19.37■□□□□ 0.69
HOXC8P31273 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HOXC8P31273 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC8P31273 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.37■□□□□ 0.69
HOXC8P31273 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.37■□□□□ 0.69
HOXC8P31273 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HOXC8P31273 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.37■□□□□ 0.69
HOXC8P31273 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.36■□□□□ 0.69
HOXC8P31273 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HOXC8P31273 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HOXC8P31273 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
HOXC8P31273 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.36■□□□□ 0.69
HOXC8P31273 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
HOXC8P31273 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms