Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHC1P29353 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SHC1P29353 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.41■□□□□ 0.22
SHC1P29353 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.41■□□□□ 0.22
SHC1P29353 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHC1P29353 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC1P29353 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHC1P29353 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC1P29353 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC1P29353 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHC1P29353 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHC1P29353 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.4■□□□□ 0.22
SHC1P29353 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC1P29353 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC1P29353 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC1P29353 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
SHC1P29353 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SHC1P29353 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC1P29353 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SHC1P29353 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SHC1P29353 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SHC1P29353 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.4■□□□□ 0.22
SHC1P29353 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.4■□□□□ 0.22
SHC1P29353 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SHC1P29353 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.39■□□□□ 0.22
SHC1P29353 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SHC1P29353 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SHC1P29353 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC1P29353 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SHC1P29353 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SHC1P29353 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SHC1P29353 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SHC1P29353 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC1P29353 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SHC1P29353 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SHC1P29353 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.39■□□□□ 0.21
SHC1P29353 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC1P29353 PCED1CP-201ENST00000419887 785 ntBASIC16.39■□□□□ 0.21
SHC1P29353 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.39■□□□□ 0.21
SHC1P29353 KRT18P48-201ENST00000434763 852 ntBASIC16.39■□□□□ 0.21
SHC1P29353 SLC25A6P5-201ENST00000435663 894 ntBASIC16.39■□□□□ 0.21
SHC1P29353 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.39■□□□□ 0.21
SHC1P29353 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.39■□□□□ 0.21
SHC1P29353 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.39■□□□□ 0.21
SHC1P29353 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SHC1P29353 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC1P29353 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.39■□□□□ 0.21
SHC1P29353 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SHC1P29353 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
SHC1P29353 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SHC1P29353 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SHC1P29353 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC1P29353 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.38■□□□□ 0.21
SHC1P29353 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHC1P29353 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SHC1P29353 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.38■□□□□ 0.21
SHC1P29353 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHC1P29353 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.38■□□□□ 0.21
SHC1P29353 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC1P29353 AP003733.1-201ENST00000491725 852 ntBASIC16.38■□□□□ 0.21
SHC1P29353 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC1P29353 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC1P29353 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.38■□□□□ 0.21
SHC1P29353 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SHC1P29353 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC1P29353 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SHC1P29353 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.38■□□□□ 0.21
SHC1P29353 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SHC1P29353 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SHC1P29353 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SHC1P29353 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms