Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.98■□□□□ 0.31
PTPN6P29350 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.98■□□□□ 0.31
PTPN6P29350 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.98■□□□□ 0.31
PTPN6P29350 MIR3917-201ENST00000580971 93 ntBASIC16.98■□□□□ 0.31
PTPN6P29350 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PTPN6P29350 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN6P29350 LINC00304-203ENST00000565008 1864 ntBASIC16.98■□□□□ 0.31
PTPN6P29350 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.98■□□□□ 0.31
PTPN6P29350 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN6P29350 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTPN6P29350 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTPN6P29350 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTPN6P29350 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTPN6P29350 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN6P29350 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PTPN6P29350 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
PTPN6P29350 AL023806.1-201ENST00000603994 1649 ntBASIC16.97■□□□□ 0.31
PTPN6P29350 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN6P29350 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN6P29350 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PTPN6P29350 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PTPN6P29350 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN6P29350 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN6P29350 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN6P29350 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN6P29350 AC092647.4-201ENST00000457211 535 ntBASIC16.97■□□□□ 0.31
PTPN6P29350 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PTPN6P29350 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN6P29350 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN6P29350 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.97■□□□□ 0.31
PTPN6P29350 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN6P29350 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
PTPN6P29350 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.97■□□□□ 0.31
PTPN6P29350 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN6P29350 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PTPN6P29350 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PTPN6P29350 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.97■□□□□ 0.31
PTPN6P29350 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTPN6P29350 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PTPN6P29350 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN6P29350 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN6P29350 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN6P29350 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN6P29350 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTPN6P29350 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTPN6P29350 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTPN6P29350 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN6P29350 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN6P29350 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN6P29350 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN6P29350 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN6P29350 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.96■□□□□ 0.3
PTPN6P29350 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.96■□□□□ 0.3
PTPN6P29350 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.96■□□□□ 0.3
PTPN6P29350 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN6P29350 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms