Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTR1EP28566 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTR1EP28566 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.16■□□□□ 0.34
HTR1EP28566 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTR1EP28566 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HTR1EP28566 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.16■□□□□ 0.34
HTR1EP28566 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTR1EP28566 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTR1EP28566 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HTR1EP28566 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.16■□□□□ 0.34
HTR1EP28566 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.15■□□□□ 0.34
HTR1EP28566 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HTR1EP28566 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HTR1EP28566 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.15■□□□□ 0.34
HTR1EP28566 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
HTR1EP28566 AC007663.1-201ENST00000438948 1240 ntBASIC17.15■□□□□ 0.34
HTR1EP28566 HOMER2P1-201ENST00000455653 964 ntBASIC17.15■□□□□ 0.34
HTR1EP28566 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HTR1EP28566 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.15■□□□□ 0.34
HTR1EP28566 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.15■□□□□ 0.34
HTR1EP28566 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
HTR1EP28566 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HTR1EP28566 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.15■□□□□ 0.34
HTR1EP28566 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HTR1EP28566 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HTR1EP28566 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HTR1EP28566 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HTR1EP28566 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
HTR1EP28566 AC022211.2-201ENST00000585075 2527 ntBASIC17.14■□□□□ 0.33
HTR1EP28566 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HTR1EP28566 OR6D1P-202ENST00000641007 5290 ntBASIC17.14■□□□□ 0.33
HTR1EP28566 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HTR1EP28566 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
HTR1EP28566 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HTR1EP28566 HCG4P8-203ENST00000443049 980 ntBASIC17.14■□□□□ 0.33
HTR1EP28566 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
HTR1EP28566 AL512604.3-201ENST00000569583 964 ntBASIC17.14■□□□□ 0.33
HTR1EP28566 AC140113.3-201ENST00000605663 199 ntBASIC17.14■□□□□ 0.33
HTR1EP28566 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HTR1EP28566 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HTR1EP28566 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.14■□□□□ 0.33
HTR1EP28566 AC096733.2-201ENST00000609937 1394 ntBASIC17.14■□□□□ 0.33
HTR1EP28566 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
HTR1EP28566 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
HTR1EP28566 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1EP28566 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HTR1EP28566 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.13■□□□□ 0.33
HTR1EP28566 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
HTR1EP28566 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.13■□□□□ 0.33
HTR1EP28566 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.13■□□□□ 0.33
HTR1EP28566 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1EP28566 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HTR1EP28566 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.13■□□□□ 0.33
HTR1EP28566 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.13■□□□□ 0.33
HTR1EP28566 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.13■□□□□ 0.33
HTR1EP28566 AL138688.1-201ENST00000624851 1594 ntBASIC17.13■□□□□ 0.33
HTR1EP28566 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.13■□□□□ 0.33
HTR1EP28566 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HTR1EP28566 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.13■□□□□ 0.33
HTR1EP28566 AL121761.2-201ENST00000598007 1648 ntBASIC17.13■□□□□ 0.33
HTR1EP28566 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HTR1EP28566 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HTR1EP28566 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HTR1EP28566 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.13■□□□□ 0.33
HTR1EP28566 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.12■□□□□ 0.33
HTR1EP28566 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.12■□□□□ 0.33
HTR1EP28566 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HTR1EP28566 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 AC099343.3-201ENST00000605834 2503 ntBASIC17.12■□□□□ 0.33
HTR1EP28566 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HTR1EP28566 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HTR1EP28566 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms