Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATF1P18846 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ATF1P18846 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATF1P18846 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.71■□□□□ 0.11
ATF1P18846 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.71■□□□□ 0.11
ATF1P18846 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.71■□□□□ 0.11
ATF1P18846 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.71■□□□□ 0.11
ATF1P18846 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.71■□□□□ 0.11
ATF1P18846 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.71■□□□□ 0.11
ATF1P18846 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ATF1P18846 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.71■□□□□ 0.11
ATF1P18846 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATF1P18846 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.71■□□□□ 0.11
ATF1P18846 PKD1P1-201ENST00000458669 6805 ntBASIC15.71■□□□□ 0.11
ATF1P18846 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
ATF1P18846 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ATF1P18846 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.71■□□□□ 0.11
ATF1P18846 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ATF1P18846 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ATF1P18846 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATF1P18846 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATF1P18846 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
ATF1P18846 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ATF1P18846 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.71■□□□□ 0.1
ATF1P18846 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 LINC01126-201ENST00000623515 1646 ntBASIC15.7■□□□□ 0.1
ATF1P18846 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 MIR718-201ENST00000390190 70 ntBASIC15.7■□□□□ 0.1
ATF1P18846 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.7■□□□□ 0.1
ATF1P18846 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
ATF1P18846 BX088651.1-201ENST00000540551 451 ntBASIC15.7■□□□□ 0.1
ATF1P18846 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ATF1P18846 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.7■□□□□ 0.1
ATF1P18846 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.7■□□□□ 0.1
ATF1P18846 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 AC092338.2-201ENST00000568827 1415 ntBASIC15.69■□□□□ 0.1
ATF1P18846 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.69■□□□□ 0.1
ATF1P18846 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.69■□□□□ 0.1
ATF1P18846 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
ATF1P18846 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.69■□□□□ 0.1
ATF1P18846 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.69■□□□□ 0.1
ATF1P18846 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
ATF1P18846 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.69■□□□□ 0.1
ATF1P18846 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.69■□□□□ 0.1
ATF1P18846 AC008550.1-201ENST00000511500 884 ntBASIC15.69■□□□□ 0.1
ATF1P18846 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.69■□□□□ 0.1
ATF1P18846 FITM1-202ENST00000559294 800 ntBASIC15.69■□□□□ 0.1
ATF1P18846 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.69■□□□□ 0.1
ATF1P18846 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.69■□□□□ 0.1
ATF1P18846 MIR4785-201ENST00000585005 73 ntBASIC15.69■□□□□ 0.1
ATF1P18846 AP000525.1-201ENST00000608286 694 ntBASIC15.69■□□□□ 0.1
ATF1P18846 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 AC112497.1-201ENST00000624824 639 ntBASIC15.69■□□□□ 0.1
ATF1P18846 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.69■□□□□ 0.1
ATF1P18846 AC116562.4-202ENST00000641738 218 ntBASIC15.69■□□□□ 0.1
ATF1P18846 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATF1P18846 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms