Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 AL691432.3-201ENST00000621860 400 ntBASIC18.92■□□□□ 0.62
PTPN1P18031 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN1P18031 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTPN1P18031 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN1P18031 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 INTS4P1-201ENST00000438455 1935 ntBASIC18.92■□□□□ 0.62
PTPN1P18031 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PTPN1P18031 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN1P18031 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN1P18031 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPN1P18031 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PTPN1P18031 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
PTPN1P18031 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPN1P18031 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPN1P18031 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPN1P18031 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.91■□□□□ 0.62
PTPN1P18031 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.91■□□□□ 0.62
PTPN1P18031 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.91■□□□□ 0.62
PTPN1P18031 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.91■□□□□ 0.62
PTPN1P18031 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.91■□□□□ 0.62
PTPN1P18031 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.91■□□□□ 0.62
PTPN1P18031 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPN1P18031 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.91■□□□□ 0.62
PTPN1P18031 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN1P18031 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN1P18031 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 KRT18P55-202ENST00000578578 1546 ntBASIC18.9■□□□□ 0.62
PTPN1P18031 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 AC010460.3-201ENST00000511359 1579 ntBASIC18.9■□□□□ 0.62
PTPN1P18031 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 EMBP1-201ENST00000458200 901 ntBASIC18.9■□□□□ 0.62
PTPN1P18031 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.9■□□□□ 0.62
PTPN1P18031 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.9■□□□□ 0.62
PTPN1P18031 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PTPN1P18031 AL121894.2-201ENST00000602977 491 ntBASIC18.9■□□□□ 0.62
PTPN1P18031 AC116407.2-201ENST00000613639 860 ntBASIC18.9■□□□□ 0.62
PTPN1P18031 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.9■□□□□ 0.62
PTPN1P18031 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PTPN1P18031 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN1P18031 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN1P18031 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN1P18031 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PTPN1P18031 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.89■□□□□ 0.62
PTPN1P18031 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.89■□□□□ 0.62
PTPN1P18031 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTPN1P18031 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTPN1P18031 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PTPN1P18031 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN1P18031 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN1P18031 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN1P18031 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.89■□□□□ 0.61
PTPN1P18031 TPM4P1-201ENST00000436100 807 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms