Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.69■■□□□ 1.06
COL11A2P13942 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL11A2P13942 AC116562.4-201ENST00000641316 2276 ntBASIC21.69■■□□□ 1.06
COL11A2P13942 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.69■■□□□ 1.06
COL11A2P13942 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.68■■□□□ 1.06
COL11A2P13942 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL11A2P13942 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL11A2P13942 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
COL11A2P13942 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.68■■□□□ 1.06
COL11A2P13942 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL11A2P13942 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL11A2P13942 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.68■■□□□ 1.06
COL11A2P13942 PTCHD3P3-201ENST00000403073 906 ntBASIC21.68■■□□□ 1.06
COL11A2P13942 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL11A2P13942 ACTG1P14-201ENST00000446382 1122 ntBASIC21.68■■□□□ 1.06
COL11A2P13942 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.68■■□□□ 1.06
COL11A2P13942 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.68■■□□□ 1.06
COL11A2P13942 AL390955.2-201ENST00000603032 514 ntBASIC21.68■■□□□ 1.06
COL11A2P13942 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.68■■□□□ 1.06
COL11A2P13942 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL11A2P13942 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL11A2P13942 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.68■■□□□ 1.06
COL11A2P13942 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL11A2P13942 AL031598.1-201ENST00000561511 1773 ntBASIC21.68■■□□□ 1.06
COL11A2P13942 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.68■■□□□ 1.06
COL11A2P13942 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
COL11A2P13942 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL11A2P13942 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL11A2P13942 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL11A2P13942 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL11A2P13942 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.67■■□□□ 1.06
COL11A2P13942 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL11A2P13942 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL11A2P13942 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL11A2P13942 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.67■■□□□ 1.06
COL11A2P13942 PAWRP1-201ENST00000451083 565 ntBASIC21.67■■□□□ 1.06
COL11A2P13942 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.67■■□□□ 1.06
COL11A2P13942 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.67■■□□□ 1.06
COL11A2P13942 HLA-J-203ENST00000494367 1087 ntBASIC21.67■■□□□ 1.06
COL11A2P13942 AC093520.2-201ENST00000561830 333 ntBASIC21.67■■□□□ 1.06
COL11A2P13942 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.67■■□□□ 1.06
COL11A2P13942 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL11A2P13942 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
COL11A2P13942 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.66■■□□□ 1.06
COL11A2P13942 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.66■■□□□ 1.06
COL11A2P13942 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
COL11A2P13942 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.66■■□□□ 1.06
COL11A2P13942 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.66■■□□□ 1.06
COL11A2P13942 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.66■■□□□ 1.06
COL11A2P13942 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.66■■□□□ 1.06
COL11A2P13942 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
COL11A2P13942 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.66■■□□□ 1.06
COL11A2P13942 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.66■■□□□ 1.06
COL11A2P13942 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.66■■□□□ 1.06
COL11A2P13942 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.66■■□□□ 1.06
COL11A2P13942 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 ACTG1P4-201ENST00000425123 1122 ntBASIC21.66■■□□□ 1.06
COL11A2P13942 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.66■■□□□ 1.06
COL11A2P13942 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
COL11A2P13942 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 AC023141.13-201ENST00000604991 943 ntBASIC21.66■■□□□ 1.06
COL11A2P13942 GGTLC5P-201ENST00000617623 998 ntBASIC21.66■■□□□ 1.06
COL11A2P13942 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.66■■□□□ 1.06
COL11A2P13942 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.66■■□□□ 1.06
COL11A2P13942 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL11A2P13942 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.66■■□□□ 1.06
COL11A2P13942 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL11A2P13942 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL11A2P13942 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL11A2P13942 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL11A2P13942 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL11A2P13942 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
COL11A2P13942 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL11A2P13942 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL11A2P13942 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COL11A2P13942 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
COL11A2P13942 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COL11A2P13942 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
COL11A2P13942 AJ011932.1-201ENST00000621707 465 ntBASIC21.65■■□□□ 1.06
COL11A2P13942 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.65■■□□□ 1.06
COL11A2P13942 AC105339.1-204ENST00000636249 355 ntBASIC21.65■■□□□ 1.06
COL11A2P13942 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COL11A2P13942 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.65■■□□□ 1.06
COL11A2P13942 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms