Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
UBCP0CG48 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 AL023806.1-201ENST00000603994 1649 ntBASIC15.71■□□□□ 0.11
UBCP0CG48 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
UBCP0CG48 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBCP0CG48 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.71■□□□□ 0.1
UBCP0CG48 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
UBCP0CG48 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBCP0CG48 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBCP0CG48 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
UBCP0CG48 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBCP0CG48 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBCP0CG48 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
UBCP0CG48 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
UBCP0CG48 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.7■□□□□ 0.1
UBCP0CG48 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.7■□□□□ 0.1
UBCP0CG48 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.7■□□□□ 0.1
UBCP0CG48 SEC1P-202ENST00000473944 940 ntBASIC15.7■□□□□ 0.1
UBCP0CG48 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.7■□□□□ 0.1
UBCP0CG48 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.7■□□□□ 0.1
UBCP0CG48 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.7■□□□□ 0.1
UBCP0CG48 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.7■□□□□ 0.1
UBCP0CG48 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 AL355312.1-201ENST00000407115 2176 ntBASIC15.7■□□□□ 0.1
UBCP0CG48 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.7■□□□□ 0.1
UBCP0CG48 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 AC133963.1-201ENST00000504166 1679 ntBASIC15.7■□□□□ 0.1
UBCP0CG48 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBCP0CG48 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.69■□□□□ 0.1
UBCP0CG48 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.69■□□□□ 0.1
UBCP0CG48 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.69■□□□□ 0.1
UBCP0CG48 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBCP0CG48 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 FER1L4-210ENST00000615531 5998 ntBASIC15.69■□□□□ 0.1
UBCP0CG48 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.69■□□□□ 0.1
UBCP0CG48 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
UBCP0CG48 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.69■□□□□ 0.1
UBCP0CG48 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.69■□□□□ 0.1
UBCP0CG48 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.69■□□□□ 0.1
UBCP0CG48 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.69■□□□□ 0.1
UBCP0CG48 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
UBCP0CG48 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.69■□□□□ 0.1
UBCP0CG48 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.69■□□□□ 0.1
UBCP0CG48 AC092865.7-201ENST00000641832 219 ntBASIC15.69■□□□□ 0.1
UBCP0CG48 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.69■□□□□ 0.1
UBCP0CG48 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBCP0CG48 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 AL138688.1-201ENST00000624851 1594 ntBASIC15.69■□□□□ 0.1
UBCP0CG48 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.69■□□□□ 0.1
UBCP0CG48 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBCP0CG48 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
UBCP0CG48 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms