Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CAPN1P07384 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN1P07384 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CAPN1P07384 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN1P07384 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CAPN1P07384 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN1P07384 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CAPN1P07384 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CAPN1P07384 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN1P07384 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CAPN1P07384 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CAPN1P07384 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CAPN1P07384 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.63■□□□□ 0.41
CAPN1P07384 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.63■□□□□ 0.41
CAPN1P07384 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN1P07384 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CAPN1P07384 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CAPN1P07384 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CAPN1P07384 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 AL024508.2-201ENST00000607749 1894 ntBASIC17.63■□□□□ 0.41
CAPN1P07384 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CAPN1P07384 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN1P07384 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CAPN1P07384 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.62■□□□□ 0.41
CAPN1P07384 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN1P07384 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CAPN1P07384 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.62■□□□□ 0.41
CAPN1P07384 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN1P07384 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.62■□□□□ 0.41
CAPN1P07384 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.62■□□□□ 0.41
CAPN1P07384 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.62■□□□□ 0.41
CAPN1P07384 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CAPN1P07384 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.62■□□□□ 0.41
CAPN1P07384 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.62■□□□□ 0.41
CAPN1P07384 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CAPN1P07384 AC010240.3-201ENST00000607688 395 ntBASIC17.62■□□□□ 0.41
CAPN1P07384 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CAPN1P07384 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN1P07384 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.62■□□□□ 0.41
CAPN1P07384 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
CAPN1P07384 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CAPN1P07384 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CAPN1P07384 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CAPN1P07384 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CAPN1P07384 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN1P07384 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.61■□□□□ 0.41
CAPN1P07384 AC069148.1-201ENST00000608741 768 ntBASIC17.61■□□□□ 0.41
CAPN1P07384 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.61■□□□□ 0.41
CAPN1P07384 AC079602.3-201ENST00000623931 403 ntBASIC17.61■□□□□ 0.41
CAPN1P07384 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.61■□□□□ 0.41
CAPN1P07384 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 AC012317.2-201ENST00000623305 2251 ntBASIC17.61■□□□□ 0.41
CAPN1P07384 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CAPN1P07384 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms