Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
APOEP02649 AP002383.4-201ENST00000442518 975 ntBASIC18.74■□□□□ 0.59
APOEP02649 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
APOEP02649 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
APOEP02649 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
APOEP02649 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.74■□□□□ 0.59
APOEP02649 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 PKD1P1-201ENST00000458669 6805 ntBASIC18.74■□□□□ 0.59
APOEP02649 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
APOEP02649 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.74■□□□□ 0.59
APOEP02649 AL096828.2-201ENST00000567259 1965 ntBASIC18.73■□□□□ 0.59
APOEP02649 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
APOEP02649 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.73■□□□□ 0.59
APOEP02649 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 VENTXP7-201ENST00000475503 772 ntBASIC18.73■□□□□ 0.59
APOEP02649 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.73■□□□□ 0.59
APOEP02649 AC092329.2-201ENST00000598402 547 ntBASIC18.73■□□□□ 0.59
APOEP02649 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.73■□□□□ 0.59
APOEP02649 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
APOEP02649 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
APOEP02649 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.73■□□□□ 0.59
APOEP02649 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.73■□□□□ 0.59
APOEP02649 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
APOEP02649 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.73■□□□□ 0.59
APOEP02649 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
APOEP02649 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
APOEP02649 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.72■□□□□ 0.59
APOEP02649 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.72■□□□□ 0.59
APOEP02649 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
APOEP02649 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
APOEP02649 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
APOEP02649 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 DRAXINP1-201ENST00000437611 948 ntBASIC18.72■□□□□ 0.59
APOEP02649 RN7SL606P-201ENST00000472779 293 ntBASIC18.72■□□□□ 0.59
APOEP02649 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.72■□□□□ 0.59
APOEP02649 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
APOEP02649 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
APOEP02649 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.71■□□□□ 0.59
APOEP02649 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.71■□□□□ 0.59
APOEP02649 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOEP02649 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOEP02649 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
APOEP02649 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.71■□□□□ 0.59
APOEP02649 AC132938.6-201ENST00000623828 1655 ntBASIC18.71■□□□□ 0.59
APOEP02649 LINC00265-3P-201ENST00000447588 903 ntBASIC18.71■□□□□ 0.59
APOEP02649 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
APOEP02649 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOEP02649 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.71■□□□□ 0.59
APOEP02649 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOEP02649 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.71■□□□□ 0.59
APOEP02649 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
APOEP02649 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
APOEP02649 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
APOEP02649 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
APOEP02649 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms