Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.9■□□□□ 0.62
ZBED1O96006 AL845331.1-201ENST00000424978 1190 ntBASIC18.9■□□□□ 0.62
ZBED1O96006 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ZBED1O96006 MTCL1P1-201ENST00000446207 792 ntBASIC18.9■□□□□ 0.62
ZBED1O96006 DUTP2-201ENST00000519164 463 ntBASIC18.9■□□□□ 0.62
ZBED1O96006 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 AC011840.4-201ENST00000578471 627 ntBASIC18.9■□□□□ 0.62
ZBED1O96006 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.9■□□□□ 0.62
ZBED1O96006 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.9■□□□□ 0.62
ZBED1O96006 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.9■□□□□ 0.62
ZBED1O96006 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.9■□□□□ 0.62
ZBED1O96006 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZBED1O96006 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZBED1O96006 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
ZBED1O96006 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZBED1O96006 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ZBED1O96006 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ZBED1O96006 AC005332.8-201ENST00000622750 2735 ntBASIC18.89■□□□□ 0.62
ZBED1O96006 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 AC068880.1-201ENST00000507289 2297 ntBASIC18.89■□□□□ 0.61
ZBED1O96006 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.89■□□□□ 0.61
ZBED1O96006 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.89■□□□□ 0.61
ZBED1O96006 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.89■□□□□ 0.61
ZBED1O96006 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZBED1O96006 AL353801.3-201ENST00000609898 542 ntBASIC18.89■□□□□ 0.61
ZBED1O96006 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.89■□□□□ 0.61
ZBED1O96006 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.89■□□□□ 0.61
ZBED1O96006 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 AC233702.3-201ENST00000578656 1387 ntBASIC18.89■□□□□ 0.61
ZBED1O96006 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.89■□□□□ 0.61
ZBED1O96006 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.89■□□□□ 0.61
ZBED1O96006 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.89■□□□□ 0.61
ZBED1O96006 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ZBED1O96006 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZBED1O96006 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZBED1O96006 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 AC246785.2-201ENST00000432512 513 ntBASIC18.88■□□□□ 0.61
ZBED1O96006 KRT18P56-201ENST00000507275 550 ntBASIC18.88■□□□□ 0.61
ZBED1O96006 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
ZBED1O96006 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ZBED1O96006 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
ZBED1O96006 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.88■□□□□ 0.61
ZBED1O96006 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZBED1O96006 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
ZBED1O96006 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.87■□□□□ 0.61
ZBED1O96006 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZBED1O96006 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZBED1O96006 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ZBED1O96006 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZBED1O96006 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZBED1O96006 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZBED1O96006 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZBED1O96006 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms