Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.04■□□□□ 0.8
GGPS1O95749 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.04■□□□□ 0.8
GGPS1O95749 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.04■□□□□ 0.8
GGPS1O95749 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.04■□□□□ 0.8
GGPS1O95749 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.04■□□□□ 0.8
GGPS1O95749 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.04■□□□□ 0.8
GGPS1O95749 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GGPS1O95749 AL671883.3-201ENST00000603274 991 ntBASIC20.04■□□□□ 0.8
GGPS1O95749 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
GGPS1O95749 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.04■□□□□ 0.8
GGPS1O95749 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.04■□□□□ 0.8
GGPS1O95749 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
GGPS1O95749 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GGPS1O95749 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
GGPS1O95749 AC009113.1-201ENST00000570267 2443 ntBASIC20.04■□□□□ 0.8
GGPS1O95749 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GGPS1O95749 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GGPS1O95749 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GGPS1O95749 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GGPS1O95749 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GGPS1O95749 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GGPS1O95749 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.04■□□□□ 0.8
GGPS1O95749 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.04■□□□□ 0.8
GGPS1O95749 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.03■□□□□ 0.8
GGPS1O95749 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GGPS1O95749 AL096828.2-201ENST00000567259 1965 ntBASIC20.03■□□□□ 0.8
GGPS1O95749 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GGPS1O95749 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.03■□□□□ 0.8
GGPS1O95749 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.03■□□□□ 0.8
GGPS1O95749 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
GGPS1O95749 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.03■□□□□ 0.8
GGPS1O95749 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.03■□□□□ 0.8
GGPS1O95749 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
GGPS1O95749 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GGPS1O95749 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.03■□□□□ 0.8
GGPS1O95749 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.03■□□□□ 0.8
GGPS1O95749 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.03■□□□□ 0.8
GGPS1O95749 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GGPS1O95749 AC022898.2-201ENST00000616822 1312 ntBASIC20.02■□□□□ 0.8
GGPS1O95749 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.02■□□□□ 0.8
GGPS1O95749 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
GGPS1O95749 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.02■□□□□ 0.8
GGPS1O95749 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.02■□□□□ 0.8
GGPS1O95749 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GGPS1O95749 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.02■□□□□ 0.8
GGPS1O95749 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.02■□□□□ 0.8
GGPS1O95749 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GGPS1O95749 AC139887.3-201ENST00000568585 713 ntBASIC20.02■□□□□ 0.8
GGPS1O95749 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.02■□□□□ 0.8
GGPS1O95749 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
GGPS1O95749 AP000867.4-201ENST00000641616 219 ntBASIC20.02■□□□□ 0.8
GGPS1O95749 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.02■□□□□ 0.8
GGPS1O95749 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GGPS1O95749 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GGPS1O95749 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
GGPS1O95749 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GGPS1O95749 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
GGPS1O95749 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
GGPS1O95749 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.02■□□□□ 0.79
GGPS1O95749 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.01■□□□□ 0.79
GGPS1O95749 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
GGPS1O95749 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
GGPS1O95749 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
GGPS1O95749 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
GGPS1O95749 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
GGPS1O95749 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GGPS1O95749 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.01■□□□□ 0.79
GGPS1O95749 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.01■□□□□ 0.79
GGPS1O95749 RPS2P1-201ENST00000434010 821 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms