Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMC2O95347 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.24■□□□□ 0.83
SMC2O95347 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SMC2O95347 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.23■□□□□ 0.83
SMC2O95347 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.23■□□□□ 0.83
SMC2O95347 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SMC2O95347 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 KRT8P9-201ENST00000558927 1449 ntBASIC20.23■□□□□ 0.83
SMC2O95347 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMC2O95347 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.23■□□□□ 0.83
SMC2O95347 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SMC2O95347 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
SMC2O95347 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.22■□□□□ 0.83
SMC2O95347 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SMC2O95347 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 MMP23A-201ENST00000234610 1017 ntBASIC20.22■□□□□ 0.83
SMC2O95347 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SMC2O95347 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 HMGA1P5-201ENST00000412453 271 ntBASIC20.22■□□□□ 0.83
SMC2O95347 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SMC2O95347 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.22■□□□□ 0.83
SMC2O95347 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.22■□□□□ 0.83
SMC2O95347 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 MIR3917-201ENST00000580971 93 ntBASIC20.22■□□□□ 0.83
SMC2O95347 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.22■□□□□ 0.83
SMC2O95347 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.22■□□□□ 0.83
SMC2O95347 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 CROCCP1-201ENST00000426910 5675 ntBASIC20.22■□□□□ 0.83
SMC2O95347 AC132938.6-201ENST00000623828 1655 ntBASIC20.22■□□□□ 0.83
SMC2O95347 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 AC022898.2-201ENST00000616822 1312 ntBASIC20.22■□□□□ 0.83
SMC2O95347 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.22■□□□□ 0.83
SMC2O95347 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMC2O95347 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMC2O95347 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 OR6D1P-203ENST00000641209 4860 ntBASIC20.21■□□□□ 0.83
SMC2O95347 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SMC2O95347 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.21■□□□□ 0.83
SMC2O95347 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SMC2O95347 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.21■□□□□ 0.83
SMC2O95347 TSPY15P-201ENST00000457163 923 ntBASIC20.21■□□□□ 0.83
SMC2O95347 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.21■□□□□ 0.83
SMC2O95347 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.21■□□□□ 0.83
SMC2O95347 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SMC2O95347 FAM87A-204ENST00000613235 858 ntBASIC20.21■□□□□ 0.83
SMC2O95347 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.21■□□□□ 0.83
SMC2O95347 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMC2O95347 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms