Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
GPC4O75487 AL024508.2-201ENST00000607749 1894 ntBASIC17.96■□□□□ 0.47
GPC4O75487 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.96■□□□□ 0.47
GPC4O75487 REXO1L9P-201ENST00000604264 2108 ntBASIC17.96■□□□□ 0.47
GPC4O75487 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GPC4O75487 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.96■□□□□ 0.47
GPC4O75487 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
GPC4O75487 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
GPC4O75487 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
GPC4O75487 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GPC4O75487 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
GPC4O75487 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 LINC01126-201ENST00000623515 1646 ntBASIC17.95■□□□□ 0.46
GPC4O75487 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.95■□□□□ 0.46
GPC4O75487 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.95■□□□□ 0.46
GPC4O75487 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.95■□□□□ 0.46
GPC4O75487 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GPC4O75487 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.95■□□□□ 0.46
GPC4O75487 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.95■□□□□ 0.46
GPC4O75487 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.95■□□□□ 0.46
GPC4O75487 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.95■□□□□ 0.46
GPC4O75487 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
GPC4O75487 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GPC4O75487 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.95■□□□□ 0.46
GPC4O75487 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GPC4O75487 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
GPC4O75487 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
GPC4O75487 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.94■□□□□ 0.46
GPC4O75487 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
GPC4O75487 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
GPC4O75487 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
GPC4O75487 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
GPC4O75487 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.94■□□□□ 0.46
GPC4O75487 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.94■□□□□ 0.46
GPC4O75487 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 AC022616.7-201ENST00000525383 220 ntBASIC17.94■□□□□ 0.46
GPC4O75487 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.94■□□□□ 0.46
GPC4O75487 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.94■□□□□ 0.46
GPC4O75487 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.94■□□□□ 0.46
GPC4O75487 LINC00896-202ENST00000609602 2128 ntBASIC17.94■□□□□ 0.46
GPC4O75487 HYMAI.1-201ENST00000620949 238 ntBASIC17.94■□□□□ 0.46
GPC4O75487 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.94■□□□□ 0.46
GPC4O75487 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.94■□□□□ 0.46
GPC4O75487 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
GPC4O75487 AL391807.1-203ENST00000604392 2365 ntBASIC17.94■□□□□ 0.46
GPC4O75487 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GPC4O75487 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
GPC4O75487 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
GPC4O75487 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC4O75487 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC4O75487 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
GPC4O75487 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC4O75487 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.93■□□□□ 0.46
GPC4O75487 HLA-F-220ENST00000434407 884 ntBASIC17.93■□□□□ 0.46
GPC4O75487 AL359075.1-203ENST00000462729 1002 ntBASIC17.93■□□□□ 0.46
GPC4O75487 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.93■□□□□ 0.46
GPC4O75487 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC4O75487 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC4O75487 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
GPC4O75487 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC4O75487 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.93■□□□□ 0.46
GPC4O75487 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
GPC4O75487 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GPC4O75487 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
GPC4O75487 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC4O75487 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC4O75487 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC4O75487 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC4O75487 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
GPC4O75487 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC4O75487 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC4O75487 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC4O75487 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms