Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LGR5O75473 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.8■□□□□ 0.76
LGR5O75473 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.8■□□□□ 0.76
LGR5O75473 MIR940-201ENST00000401276 94 ntBASIC19.8■□□□□ 0.76
LGR5O75473 MIR1233-2-201ENST00000408138 82 ntBASIC19.8■□□□□ 0.76
LGR5O75473 MIR1233-1-201ENST00000408722 82 ntBASIC19.8■□□□□ 0.76
LGR5O75473 AC103564.2-201ENST00000432853 1299 ntBASIC19.8■□□□□ 0.76
LGR5O75473 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LGR5O75473 AC073592.4-201ENST00000623827 446 ntBASIC19.8■□□□□ 0.76
LGR5O75473 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LGR5O75473 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LGR5O75473 AC079776.2-201ENST00000641154 1609 ntBASIC19.8■□□□□ 0.76
LGR5O75473 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 AC090164.3-201ENST00000610780 2143 ntBASIC19.79■□□□□ 0.76
LGR5O75473 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.79■□□□□ 0.76
LGR5O75473 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.79■□□□□ 0.76
LGR5O75473 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
LGR5O75473 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.79■□□□□ 0.76
LGR5O75473 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.79■□□□□ 0.76
LGR5O75473 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.79■□□□□ 0.76
LGR5O75473 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LGR5O75473 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.79■□□□□ 0.76
LGR5O75473 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.79■□□□□ 0.76
LGR5O75473 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LGR5O75473 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.79■□□□□ 0.76
LGR5O75473 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LGR5O75473 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.79■□□□□ 0.76
LGR5O75473 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LGR5O75473 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.78■□□□□ 0.76
LGR5O75473 AC100803.2-201ENST00000562459 1963 ntBASIC19.78■□□□□ 0.76
LGR5O75473 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LGR5O75473 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
LGR5O75473 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.78■□□□□ 0.76
LGR5O75473 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.78■□□□□ 0.76
LGR5O75473 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.78■□□□□ 0.76
LGR5O75473 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LGR5O75473 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.78■□□□□ 0.76
LGR5O75473 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.78■□□□□ 0.76
LGR5O75473 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.78■□□□□ 0.76
LGR5O75473 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
LGR5O75473 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LGR5O75473 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LGR5O75473 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LGR5O75473 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LGR5O75473 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.77■□□□□ 0.76
LGR5O75473 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.77■□□□□ 0.76
LGR5O75473 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 BX842568.4-201ENST00000421222 227 ntBASIC19.77■□□□□ 0.76
LGR5O75473 RPS2P1-201ENST00000434010 821 ntBASIC19.77■□□□□ 0.76
LGR5O75473 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.77■□□□□ 0.76
LGR5O75473 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.77■□□□□ 0.76
LGR5O75473 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.77■□□□□ 0.76
LGR5O75473 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LGR5O75473 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms