Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 AC011506.1-201ENST00000474329 610 ntBASIC13.97□□□□□ -0.17
ZNF253O75346 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 AC006058.3-201ENST00000606217 1069 ntBASIC13.97□□□□□ -0.17
ZNF253O75346 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.97□□□□□ -0.17
ZNF253O75346 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF253O75346 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZNF253O75346 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 KRT8P50-201ENST00000562022 1438 ntBASIC13.97□□□□□ -0.17
ZNF253O75346 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.97□□□□□ -0.17
ZNF253O75346 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF253O75346 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
ZNF253O75346 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ZNF253O75346 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF253O75346 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
ZNF253O75346 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF253O75346 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF253O75346 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ZNF253O75346 AL596257.1-201ENST00000641463 2694 ntBASIC13.96□□□□□ -0.17
ZNF253O75346 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ZNF253O75346 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.96□□□□□ -0.17
ZNF253O75346 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF253O75346 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 AC008622.2-201ENST00000617006 1229 ntBASIC13.96□□□□□ -0.17
ZNF253O75346 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ZNF253O75346 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF253O75346 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ZNF253O75346 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF253O75346 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF253O75346 AL135905.2-201ENST00000584934 1404 ntBASIC13.96□□□□□ -0.18
ZNF253O75346 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.96□□□□□ -0.18
ZNF253O75346 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF253O75346 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF253O75346 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
ZNF253O75346 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.96□□□□□ -0.18
ZNF253O75346 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF253O75346 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF253O75346 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF253O75346 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.96□□□□□ -0.18
ZNF253O75346 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF253O75346 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
ZNF253O75346 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.96□□□□□ -0.18
ZNF253O75346 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC13.96□□□□□ -0.18
ZNF253O75346 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.96□□□□□ -0.18
ZNF253O75346 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.95□□□□□ -0.18
ZNF253O75346 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF253O75346 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ZNF253O75346 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.95□□□□□ -0.18
ZNF253O75346 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ZNF253O75346 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.95□□□□□ -0.18
ZNF253O75346 AC022211.2-201ENST00000585075 2527 ntBASIC13.95□□□□□ -0.18
ZNF253O75346 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 AL096828.2-201ENST00000567259 1965 ntBASIC13.95□□□□□ -0.18
ZNF253O75346 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF253O75346 MIR149-201ENST00000384879 89 ntBASIC13.95□□□□□ -0.18
ZNF253O75346 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF253O75346 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF253O75346 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
ZNF253O75346 C1QBPP2-201ENST00000528754 825 ntBASIC13.95□□□□□ -0.18
ZNF253O75346 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms