Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GFRA3O60609 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 HAUS4P1-201ENST00000406739 1145 ntBASIC17.24■□□□□ 0.35
GFRA3O60609 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.24■□□□□ 0.35
GFRA3O60609 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.24■□□□□ 0.35
GFRA3O60609 AC103564.2-201ENST00000432853 1299 ntBASIC17.24■□□□□ 0.35
GFRA3O60609 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.24■□□□□ 0.35
GFRA3O60609 RN7SL589P-201ENST00000481268 310 ntBASIC17.24■□□□□ 0.35
GFRA3O60609 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.24■□□□□ 0.35
GFRA3O60609 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.24■□□□□ 0.35
GFRA3O60609 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.24■□□□□ 0.35
GFRA3O60609 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.24■□□□□ 0.35
GFRA3O60609 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.24■□□□□ 0.35
GFRA3O60609 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.24■□□□□ 0.35
GFRA3O60609 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.24■□□□□ 0.35
GFRA3O60609 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
GFRA3O60609 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GFRA3O60609 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.24■□□□□ 0.35
GFRA3O60609 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.23■□□□□ 0.35
GFRA3O60609 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GFRA3O60609 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.23■□□□□ 0.35
GFRA3O60609 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
GFRA3O60609 AC241585.1-201ENST00000433527 519 ntBASIC17.23■□□□□ 0.35
GFRA3O60609 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.23■□□□□ 0.35
GFRA3O60609 AC004890.2-204ENST00000481968 304 ntBASIC17.23■□□□□ 0.35
GFRA3O60609 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.23■□□□□ 0.35
GFRA3O60609 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.23■□□□□ 0.35
GFRA3O60609 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
GFRA3O60609 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.23■□□□□ 0.35
GFRA3O60609 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GFRA3O60609 AC138969.3-201ENST00000546612 1459 ntBASIC17.23■□□□□ 0.35
GFRA3O60609 AC138932.2-201ENST00000548268 1459 ntBASIC17.23■□□□□ 0.35
GFRA3O60609 AC126755.4-201ENST00000549796 1459 ntBASIC17.23■□□□□ 0.35
GFRA3O60609 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.23■□□□□ 0.35
GFRA3O60609 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
GFRA3O60609 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GFRA3O60609 AL391422.3-201ENST00000603791 2761 ntBASIC17.23■□□□□ 0.35
GFRA3O60609 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.23■□□□□ 0.35
GFRA3O60609 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.22■□□□□ 0.35
GFRA3O60609 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GFRA3O60609 AC148477.5-201ENST00000625164 1645 ntBASIC17.22■□□□□ 0.35
GFRA3O60609 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA3O60609 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
GFRA3O60609 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
GFRA3O60609 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA3O60609 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GFRA3O60609 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.22■□□□□ 0.35
GFRA3O60609 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GFRA3O60609 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.22■□□□□ 0.35
GFRA3O60609 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.22■□□□□ 0.35
GFRA3O60609 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.22■□□□□ 0.35
GFRA3O60609 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.22■□□□□ 0.35
GFRA3O60609 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GFRA3O60609 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.22■□□□□ 0.35
GFRA3O60609 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA3O60609 AL162274.1-201ENST00000617191 1098 ntBASIC17.22■□□□□ 0.35
GFRA3O60609 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GFRA3O60609 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.22■□□□□ 0.35
GFRA3O60609 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GFRA3O60609 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.21■□□□□ 0.35
GFRA3O60609 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.21■□□□□ 0.35
GFRA3O60609 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
GFRA3O60609 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 MRPS18AP1-201ENST00000414458 589 ntBASIC17.21■□□□□ 0.35
GFRA3O60609 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.21■□□□□ 0.35
GFRA3O60609 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.21■□□□□ 0.35
GFRA3O60609 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.21■□□□□ 0.35
GFRA3O60609 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.21■□□□□ 0.35
GFRA3O60609 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
GFRA3O60609 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFRA3O60609 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.21■□□□□ 0.35
GFRA3O60609 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms