Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.11■□□□□ 0.33
LCMT2O60294 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.11■□□□□ 0.33
LCMT2O60294 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LCMT2O60294 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.11■□□□□ 0.33
LCMT2O60294 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.11■□□□□ 0.33
LCMT2O60294 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LCMT2O60294 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.1■□□□□ 0.33
LCMT2O60294 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
LCMT2O60294 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 AC009949.1-201ENST00000623048 1830 ntBASIC17.1■□□□□ 0.33
LCMT2O60294 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.1■□□□□ 0.33
LCMT2O60294 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.1■□□□□ 0.33
LCMT2O60294 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.1■□□□□ 0.33
LCMT2O60294 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.1■□□□□ 0.33
LCMT2O60294 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.1■□□□□ 0.33
LCMT2O60294 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.1■□□□□ 0.33
LCMT2O60294 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.1■□□□□ 0.33
LCMT2O60294 AC005336.2-201ENST00000593183 939 ntBASIC17.1■□□□□ 0.33
LCMT2O60294 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.1■□□□□ 0.33
LCMT2O60294 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 AC233702.3-201ENST00000578656 1387 ntBASIC17.1■□□□□ 0.33
LCMT2O60294 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 AC006116.8-202ENST00000587620 1550 ntBASIC17.1■□□□□ 0.33
LCMT2O60294 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LCMT2O60294 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LCMT2O60294 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LCMT2O60294 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LCMT2O60294 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 AC134043.2-201ENST00000624206 2238 ntBASIC17.09■□□□□ 0.33
LCMT2O60294 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
LCMT2O60294 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.09■□□□□ 0.33
LCMT2O60294 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LCMT2O60294 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LCMT2O60294 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
LCMT2O60294 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LCMT2O60294 TOB2P1-201ENST00000469761 992 ntBASIC17.09■□□□□ 0.33
LCMT2O60294 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.09■□□□□ 0.33
LCMT2O60294 AC092329.2-201ENST00000598402 547 ntBASIC17.09■□□□□ 0.33
LCMT2O60294 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.09■□□□□ 0.33
LCMT2O60294 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.09■□□□□ 0.33
LCMT2O60294 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.09■□□□□ 0.33
LCMT2O60294 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.09■□□□□ 0.33
LCMT2O60294 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LCMT2O60294 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LCMT2O60294 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.08■□□□□ 0.33
LCMT2O60294 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LCMT2O60294 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCMT2O60294 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCMT2O60294 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCMT2O60294 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LCMT2O60294 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LCMT2O60294 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.08■□□□□ 0.33
LCMT2O60294 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LCMT2O60294 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.08■□□□□ 0.33
LCMT2O60294 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.08■□□□□ 0.33
LCMT2O60294 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LCMT2O60294 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms