Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TSPY18P-201ENST00000441642 509 ntBASIC17.16■□□□□ 0.34
PRICKLE3O43900 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 MINOS1P3-201ENST00000457048 203 ntBASIC17.16■□□□□ 0.34
PRICKLE3O43900 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRICKLE3O43900 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRICKLE3O43900 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRICKLE3O43900 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 TP73-AS1-210ENST00000637775 1455 ntBASIC17.16■□□□□ 0.34
PRICKLE3O43900 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRICKLE3O43900 AC009949.1-201ENST00000623048 1830 ntBASIC17.16■□□□□ 0.34
PRICKLE3O43900 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.16■□□□□ 0.34
PRICKLE3O43900 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRICKLE3O43900 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRICKLE3O43900 AC008764.6-201ENST00000595909 2069 ntBASIC17.16■□□□□ 0.34
PRICKLE3O43900 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRICKLE3O43900 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRICKLE3O43900 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 DDX43P3-201ENST00000441064 443 ntBASIC17.15■□□□□ 0.34
PRICKLE3O43900 FOSL1P1-201ENST00000511041 816 ntBASIC17.15■□□□□ 0.34
PRICKLE3O43900 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.15■□□□□ 0.34
PRICKLE3O43900 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRICKLE3O43900 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
PRICKLE3O43900 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PRICKLE3O43900 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 RCN1P2-201ENST00000398357 915 ntBASIC17.14■□□□□ 0.33
PRICKLE3O43900 AC026396.1-201ENST00000419388 421 ntBASIC17.14■□□□□ 0.33
PRICKLE3O43900 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 AC116407.2-201ENST00000613639 860 ntBASIC17.14■□□□□ 0.33
PRICKLE3O43900 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 AC006116.8-202ENST00000587620 1550 ntBASIC17.14■□□□□ 0.33
PRICKLE3O43900 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PRICKLE3O43900 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRICKLE3O43900 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRICKLE3O43900 INTS4P1-201ENST00000438455 1935 ntBASIC17.13■□□□□ 0.33
PRICKLE3O43900 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
PRICKLE3O43900 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRICKLE3O43900 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRICKLE3O43900 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRICKLE3O43900 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRICKLE3O43900 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRICKLE3O43900 COX5BP2-201ENST00000392354 334 ntBASIC17.13■□□□□ 0.33
PRICKLE3O43900 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms