Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.54■□□□□ 0.4
ITM2AO43736 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.54■□□□□ 0.4
ITM2AO43736 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.54■□□□□ 0.4
ITM2AO43736 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.54■□□□□ 0.4
ITM2AO43736 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITM2AO43736 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.54■□□□□ 0.4
ITM2AO43736 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ITM2AO43736 AC011270.2-201ENST00000624293 2550 ntBASIC17.54■□□□□ 0.4
ITM2AO43736 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITM2AO43736 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITM2AO43736 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.54■□□□□ 0.4
ITM2AO43736 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITM2AO43736 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITM2AO43736 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ITM2AO43736 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ITM2AO43736 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ITM2AO43736 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.53■□□□□ 0.4
ITM2AO43736 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ITM2AO43736 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ITM2AO43736 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 AC018695.7-201ENST00000624587 2492 ntBASIC17.53■□□□□ 0.4
ITM2AO43736 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.53■□□□□ 0.4
ITM2AO43736 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 AL355355.2-201ENST00000442321 338 ntBASIC17.53■□□□□ 0.4
ITM2AO43736 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 AL049637.2-201ENST00000641778 930 ntBASIC17.53■□□□□ 0.4
ITM2AO43736 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.53■□□□□ 0.4
ITM2AO43736 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 AGGF1P2-201ENST00000426656 2106 ntBASIC17.53■□□□□ 0.4
ITM2AO43736 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.53■□□□□ 0.4
ITM2AO43736 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ITM2AO43736 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
ITM2AO43736 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.52■□□□□ 0.4
ITM2AO43736 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.52■□□□□ 0.4
ITM2AO43736 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
ITM2AO43736 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
ITM2AO43736 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 AC022898.2-201ENST00000616822 1312 ntBASIC17.52■□□□□ 0.4
ITM2AO43736 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.52■□□□□ 0.4
ITM2AO43736 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.52■□□□□ 0.4
ITM2AO43736 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.52■□□□□ 0.4
ITM2AO43736 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.52■□□□□ 0.4
ITM2AO43736 AC026471.5-201ENST00000615068 467 ntBASIC17.52■□□□□ 0.4
ITM2AO43736 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
ITM2AO43736 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.52■□□□□ 0.4
ITM2AO43736 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ITM2AO43736 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ITM2AO43736 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ITM2AO43736 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ITM2AO43736 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ITM2AO43736 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ITM2AO43736 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ITM2AO43736 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ITM2AO43736 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ITM2AO43736 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ITM2AO43736 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.51■□□□□ 0.39
ITM2AO43736 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ITM2AO43736 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.51■□□□□ 0.39
ITM2AO43736 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ITM2AO43736 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ITM2AO43736 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ITM2AO43736 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ITM2AO43736 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ITM2AO43736 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ITM2AO43736 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ITM2AO43736 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ITM2AO43736 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms