Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
PHGDHO43175 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.81■□□□□ 0.44
PHGDHO43175 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 AL023973.1-201ENST00000624619 620 ntBASIC17.81■□□□□ 0.44
PHGDHO43175 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.81■□□□□ 0.44
PHGDHO43175 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.81■□□□□ 0.44
PHGDHO43175 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PHGDHO43175 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 AP000523.1-201ENST00000398242 1049 ntBASIC17.8■□□□□ 0.44
PHGDHO43175 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.8■□□□□ 0.44
PHGDHO43175 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 AC008687.5-201ENST00000593746 558 ntBASIC17.8■□□□□ 0.44
PHGDHO43175 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
PHGDHO43175 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.8■□□□□ 0.44
PHGDHO43175 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PHGDHO43175 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PHGDHO43175 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.8■□□□□ 0.44
PHGDHO43175 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
PHGDHO43175 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.79■□□□□ 0.44
PHGDHO43175 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PHGDHO43175 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 AC022898.2-201ENST00000616822 1312 ntBASIC17.79■□□□□ 0.44
PHGDHO43175 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PHGDHO43175 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.79■□□□□ 0.44
PHGDHO43175 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.79■□□□□ 0.44
PHGDHO43175 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PHGDHO43175 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PHGDHO43175 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.79■□□□□ 0.44
PHGDHO43175 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.79■□□□□ 0.44
PHGDHO43175 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.79■□□□□ 0.44
PHGDHO43175 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.79■□□□□ 0.44
PHGDHO43175 AL138966.2-201ENST00000621997 464 ntBASIC17.79■□□□□ 0.44
PHGDHO43175 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.79■□□□□ 0.44
PHGDHO43175 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PHGDHO43175 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.79■□□□□ 0.44
PHGDHO43175 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PHGDHO43175 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHGDHO43175 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHGDHO43175 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHGDHO43175 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
PHGDHO43175 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.78■□□□□ 0.44
PHGDHO43175 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PHGDHO43175 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
PHGDHO43175 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHGDHO43175 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PHGDHO43175 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms