Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.11■□□□□ 0.65
SPTLC1O15269 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 AC097374.2-201ENST00000618617 1306 ntBASIC19.11■□□□□ 0.65
SPTLC1O15269 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.11■□□□□ 0.65
SPTLC1O15269 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.11■□□□□ 0.65
SPTLC1O15269 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.11■□□□□ 0.65
SPTLC1O15269 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.11■□□□□ 0.65
SPTLC1O15269 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.11■□□□□ 0.65
SPTLC1O15269 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.11■□□□□ 0.65
SPTLC1O15269 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.11■□□□□ 0.65
SPTLC1O15269 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SPTLC1O15269 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SPTLC1O15269 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
SPTLC1O15269 AC139530.3-201ENST00000620344 690 ntBASIC19.11■□□□□ 0.65
SPTLC1O15269 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.11■□□□□ 0.65
SPTLC1O15269 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SPTLC1O15269 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.11■□□□□ 0.65
SPTLC1O15269 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SPTLC1O15269 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.11■□□□□ 0.65
SPTLC1O15269 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.11■□□□□ 0.65
SPTLC1O15269 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPTLC1O15269 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.1■□□□□ 0.65
SPTLC1O15269 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 AC022898.2-201ENST00000616822 1312 ntBASIC19.1■□□□□ 0.65
SPTLC1O15269 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 AC096633.1-201ENST00000422446 749 ntBASIC19.1■□□□□ 0.65
SPTLC1O15269 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.1■□□□□ 0.65
SPTLC1O15269 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 SAPCD2P3-201ENST00000455031 850 ntBASIC19.1■□□□□ 0.65
SPTLC1O15269 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.1■□□□□ 0.65
SPTLC1O15269 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.1■□□□□ 0.65
SPTLC1O15269 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
SPTLC1O15269 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.1■□□□□ 0.65
SPTLC1O15269 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPTLC1O15269 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.1■□□□□ 0.65
SPTLC1O15269 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.1■□□□□ 0.65
SPTLC1O15269 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SPTLC1O15269 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SPTLC1O15269 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPTLC1O15269 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPTLC1O15269 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.1■□□□□ 0.65
SPTLC1O15269 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.1■□□□□ 0.65
SPTLC1O15269 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SPTLC1O15269 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPTLC1O15269 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPTLC1O15269 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SPTLC1O15269 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.09■□□□□ 0.65
SPTLC1O15269 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.09■□□□□ 0.65
SPTLC1O15269 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.09■□□□□ 0.65
SPTLC1O15269 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.09■□□□□ 0.65
SPTLC1O15269 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.09■□□□□ 0.65
SPTLC1O15269 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.09■□□□□ 0.65
SPTLC1O15269 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.09■□□□□ 0.65
SPTLC1O15269 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.09■□□□□ 0.65
SPTLC1O15269 AL121912.1-201ENST00000603683 238 ntBASIC19.09■□□□□ 0.65
SPTLC1O15269 AP001269.4-201ENST00000609611 512 ntBASIC19.09■□□□□ 0.65
SPTLC1O15269 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.09■□□□□ 0.65
SPTLC1O15269 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SPTLC1O15269 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SPTLC1O15269 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.09■□□□□ 0.65
SPTLC1O15269 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPTLC1O15269 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPTLC1O15269 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.08■□□□□ 0.65
SPTLC1O15269 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.08■□□□□ 0.65
SPTLC1O15269 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPTLC1O15269 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPTLC1O15269 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms