Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CEP290O15078 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CEP290O15078 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CEP290O15078 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CEP290O15078 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CEP290O15078 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.21■□□□□ 0.67
CEP290O15078 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.21■□□□□ 0.67
CEP290O15078 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.21■□□□□ 0.67
CEP290O15078 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.21■□□□□ 0.67
CEP290O15078 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CEP290O15078 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.21■□□□□ 0.67
CEP290O15078 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CEP290O15078 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CEP290O15078 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.21■□□□□ 0.66
CEP290O15078 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CEP290O15078 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.21■□□□□ 0.66
CEP290O15078 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.66
CEP290O15078 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CEP290O15078 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 AC122714.2-201ENST00000502787 707 ntBASIC19.2■□□□□ 0.66
CEP290O15078 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.2■□□□□ 0.66
CEP290O15078 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.2■□□□□ 0.66
CEP290O15078 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CEP290O15078 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 AL020989.1-201ENST00000422979 469 ntBASIC19.2■□□□□ 0.66
CEP290O15078 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CEP290O15078 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CEP290O15078 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.2■□□□□ 0.66
CEP290O15078 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.2■□□□□ 0.66
CEP290O15078 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 HCG4-201ENST00000418983 998 ntBASIC19.19■□□□□ 0.66
CEP290O15078 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.19■□□□□ 0.66
CEP290O15078 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.19■□□□□ 0.66
CEP290O15078 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.19■□□□□ 0.66
CEP290O15078 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 SPTSSB-204ENST00000617024 1292 ntBASIC19.19■□□□□ 0.66
CEP290O15078 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CEP290O15078 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CEP290O15078 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.19■□□□□ 0.66
CEP290O15078 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CEP290O15078 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CEP290O15078 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.19■□□□□ 0.66
CEP290O15078 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.19■□□□□ 0.66
CEP290O15078 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CEP290O15078 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.19■□□□□ 0.66
CEP290O15078 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CEP290O15078 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
CEP290O15078 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CEP290O15078 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CEP290O15078 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.18■□□□□ 0.66
CEP290O15078 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.18■□□□□ 0.66
CEP290O15078 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CEP290O15078 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CEP290O15078 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.18■□□□□ 0.66
CEP290O15078 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CEP290O15078 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.18■□□□□ 0.66
CEP290O15078 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CEP290O15078 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CEP290O15078 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.18■□□□□ 0.66
CEP290O15078 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.18■□□□□ 0.66
CEP290O15078 AL135744.1-201ENST00000565098 629 ntBASIC19.18■□□□□ 0.66
CEP290O15078 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.18■□□□□ 0.66
CEP290O15078 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CEP290O15078 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CEP290O15078 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.18■□□□□ 0.66
CEP290O15078 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CEP290O15078 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CEP290O15078 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CEP290O15078 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CEP290O15078 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CEP290O15078 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms