Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD2O14647 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD2O14647 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
CHD2O14647 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
CHD2O14647 AL590787.1-201ENST00000568856 1315 ntBASIC24.66■■□□□ 1.54
CHD2O14647 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC24.66■■□□□ 1.54
CHD2O14647 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CHD2O14647 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CHD2O14647 AC236430.1-201ENST00000402231 743 ntBASIC24.65■■□□□ 1.54
CHD2O14647 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC24.65■■□□□ 1.54
CHD2O14647 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC24.65■■□□□ 1.54
CHD2O14647 AC005225.4-201ENST00000557330 545 ntBASIC24.65■■□□□ 1.54
CHD2O14647 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC24.65■■□□□ 1.54
CHD2O14647 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD2O14647 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC24.65■■□□□ 1.54
CHD2O14647 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC24.65■■□□□ 1.54
CHD2O14647 HLA-DRB6-201ENST00000411500 1235 ntBASIC24.65■■□□□ 1.54
CHD2O14647 AC007274.1-201ENST00000439805 662 ntBASIC24.65■■□□□ 1.54
CHD2O14647 AC002472.2-201ENST00000442739 958 ntBASIC24.65■■□□□ 1.54
CHD2O14647 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC24.65■■□□□ 1.54
CHD2O14647 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC24.65■■□□□ 1.54
CHD2O14647 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC24.65■■□□□ 1.54
CHD2O14647 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD2O14647 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD2O14647 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD2O14647 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD2O14647 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CHD2O14647 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CHD2O14647 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC24.64■■□□□ 1.54
CHD2O14647 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD2O14647 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC24.64■■□□□ 1.54
CHD2O14647 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD2O14647 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD2O14647 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CHD2O14647 KRT18P32-201ENST00000424695 1287 ntBASIC24.64■■□□□ 1.54
CHD2O14647 AC005034.1-201ENST00000426657 489 ntBASIC24.64■■□□□ 1.54
CHD2O14647 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD2O14647 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CHD2O14647 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC24.64■■□□□ 1.54
CHD2O14647 STK25P1-201ENST00000585406 838 ntBASIC24.64■■□□□ 1.54
CHD2O14647 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD2O14647 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.54
CHD2O14647 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
CHD2O14647 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC24.64■■□□□ 1.53
CHD2O14647 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
CHD2O14647 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CHD2O14647 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC24.64■■□□□ 1.53
CHD2O14647 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC24.63■■□□□ 1.53
CHD2O14647 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC24.63■■□□□ 1.53
CHD2O14647 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC24.63■■□□□ 1.53
CHD2O14647 NAA60-208ENST00000570819 833 ntTSL 2 BASIC24.63■■□□□ 1.53
CHD2O14647 AP001059.3-201ENST00000619053 235 ntBASIC24.63■■□□□ 1.53
CHD2O14647 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.63■■□□□ 1.53
CHD2O14647 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC24.63■■□□□ 1.53
CHD2O14647 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC24.63■■□□□ 1.53
CHD2O14647 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC24.63■■□□□ 1.53
CHD2O14647 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.63■■□□□ 1.53
CHD2O14647 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
CHD2O14647 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC24.63■■□□□ 1.53
CHD2O14647 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC24.63■■□□□ 1.53
CHD2O14647 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC24.63■■□□□ 1.53
CHD2O14647 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC24.63■■□□□ 1.53
CHD2O14647 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CHD2O14647 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC24.63■■□□□ 1.53
CHD2O14647 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHD2O14647 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CHD2O14647 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD2O14647 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD2O14647 FALEC-201ENST00000416894 566 ntTSL 3 BASIC24.62■■□□□ 1.53
CHD2O14647 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC24.62■■□□□ 1.53
CHD2O14647 KRT8P48-201ENST00000515599 1220 ntBASIC24.62■■□□□ 1.53
CHD2O14647 DUT-210ENST00000559935 569 ntTSL 3 BASIC24.62■■□□□ 1.53
CHD2O14647 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CHD2O14647 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC24.62■■□□□ 1.53
CHD2O14647 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC24.62■■□□□ 1.53
CHD2O14647 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD2O14647 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD2O14647 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CHD2O14647 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD2O14647 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC24.61■■□□□ 1.53
CHD2O14647 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CHD2O14647 AC112191.1-201ENST00000523689 701 ntBASIC24.61■■□□□ 1.53
CHD2O14647 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC24.61■■□□□ 1.53
CHD2O14647 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CHD2O14647 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC24.61■■□□□ 1.53
CHD2O14647 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CHD2O14647 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms