Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COPEO14579 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COPEO14579 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COPEO14579 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.9■□□□□ 0.46
COPEO14579 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
COPEO14579 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COPEO14579 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
COPEO14579 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.9■□□□□ 0.46
COPEO14579 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.9■□□□□ 0.46
COPEO14579 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.9■□□□□ 0.46
COPEO14579 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.9■□□□□ 0.46
COPEO14579 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
COPEO14579 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COPEO14579 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COPEO14579 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
COPEO14579 LINC00304-203ENST00000565008 1864 ntBASIC17.9■□□□□ 0.46
COPEO14579 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.9■□□□□ 0.46
COPEO14579 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COPEO14579 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.9■□□□□ 0.46
COPEO14579 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COPEO14579 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
COPEO14579 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
COPEO14579 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.89■□□□□ 0.46
COPEO14579 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.89■□□□□ 0.46
COPEO14579 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
COPEO14579 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.89■□□□□ 0.46
COPEO14579 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COPEO14579 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.89■□□□□ 0.46
COPEO14579 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COPEO14579 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
COPEO14579 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.89■□□□□ 0.46
COPEO14579 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
COPEO14579 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COPEO14579 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.89■□□□□ 0.45
COPEO14579 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 REXO1L10P-201ENST00000615707 1290 ntBASIC17.89■□□□□ 0.45
COPEO14579 REXO1L12P-201ENST00000622156 912 ntBASIC17.89■□□□□ 0.45
COPEO14579 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
COPEO14579 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COPEO14579 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COPEO14579 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COPEO14579 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COPEO14579 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.88■□□□□ 0.45
COPEO14579 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.88■□□□□ 0.45
COPEO14579 HLA-J-201ENST00000462773 1622 ntBASIC17.88■□□□□ 0.45
COPEO14579 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COPEO14579 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
COPEO14579 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms