Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
C1QTNF9BB2RNN3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 AL024508.2-201ENST00000607749 1894 ntBASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 AL627223.1-201ENST00000416693 442 ntBASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 AC051619.7-201ENST00000568314 623 ntBASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 AC023141.13-201ENST00000604991 943 ntBASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 AC007064.4-201ENST00000637740 555 ntBASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
C1QTNF9BB2RNN3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C1QTNF9BB2RNN3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
C1QTNF9BB2RNN3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 NME2P1-201ENST00000426182 414 ntBASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 KRT18P65-201ENST00000439811 1286 ntBASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 AC027307.3-201ENST00000594262 1100 ntBASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 AL353135.1-201ENST00000606729 504 ntBASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 AD001527.2-201ENST00000622994 785 ntBASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 IRX1P1-201ENST00000438849 1838 ntBASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
C1QTNF9BB2RNN3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
C1QTNF9BB2RNN3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms