Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01548A6NM66 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC01548A6NM66 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LINC01548A6NM66 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01548A6NM66 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LINC01548A6NM66 MINOS1P3-201ENST00000457048 203 ntBASIC14.12□□□□□ -0.15
LINC01548A6NM66 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC01548A6NM66 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.12□□□□□ -0.15
LINC01548A6NM66 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC01548A6NM66 AC138894.3-201ENST00000603787 634 ntBASIC14.12□□□□□ -0.15
LINC01548A6NM66 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01548A6NM66 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01548A6NM66 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01548A6NM66 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01548A6NM66 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01548A6NM66 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC01548A6NM66 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01548A6NM66 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC01548A6NM66 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 FLJ13224-201ENST00000313737 1514 ntBASIC14.11□□□□□ -0.15
LINC01548A6NM66 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 AC246785.2-201ENST00000432512 513 ntBASIC14.11□□□□□ -0.15
LINC01548A6NM66 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 VENTXP7-201ENST00000475503 772 ntBASIC14.11□□□□□ -0.15
LINC01548A6NM66 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 PRELID1P1-202ENST00000567272 903 ntBASIC14.11□□□□□ -0.15
LINC01548A6NM66 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LINC01548A6NM66 AC022898.2-201ENST00000616822 1312 ntBASIC14.11□□□□□ -0.15
LINC01548A6NM66 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC01548A6NM66 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 AC125634.1-201ENST00000438758 1403 ntBASIC14.1□□□□□ -0.15
LINC01548A6NM66 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 AL732292.2-201ENST00000609649 430 ntBASIC14.1□□□□□ -0.15
LINC01548A6NM66 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC01548A6NM66 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC01548A6NM66 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01548A6NM66 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01548A6NM66 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01548A6NM66 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC01548A6NM66 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC01548A6NM66 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms