Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC01549A6NIU2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 FLJ16779-201ENST00000612722 7638 ntBASIC12.74□□□□□ -0.37
LINC01549A6NIU2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 AC060766.5-201ENST00000590539 871 ntBASIC12.74□□□□□ -0.37
LINC01549A6NIU2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 AC131212.4-201ENST00000623606 975 ntBASIC12.74□□□□□ -0.37
LINC01549A6NIU2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC01549A6NIU2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 AC016396.2-201ENST00000562575 1417 ntBASIC12.73□□□□□ -0.37
LINC01549A6NIU2 CROCCP2-202ENST00000412962 2773 ntBASIC12.73□□□□□ -0.37
LINC01549A6NIU2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LINC01549A6NIU2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 NBPF21P-201ENST00000425093 1451 ntBASIC12.72□□□□□ -0.37
LINC01549A6NIU2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LINC01549A6NIU2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms