Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PLEKHD1A6NEE1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PLEKHD1A6NEE1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 AP002414.1-201ENST00000391405 1147 ntBASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 TSEN15P1-201ENST00000423257 515 ntBASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 AC011467.4-201ENST00000594891 528 ntBASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 AC093028.1-201ENST00000622998 982 ntBASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PLEKHD1A6NEE1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
PLEKHD1A6NEE1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 FAM58CP-201ENST00000435741 640 ntBASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 AC074386.1-202ENST00000463561 864 ntBASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 GGTLC5P-201ENST00000617623 998 ntBASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 AC025580.3-201ENST00000617932 1424 ntBASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PLEKHD1A6NEE1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 STOM-202ENST00000347359 870 ntTSL 2 BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 SPCS2P1-201ENST00000561636 679 ntBASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 AC109462.3-201ENST00000573934 613 ntBASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 STK25P1-201ENST00000585406 838 ntBASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
PLEKHD1A6NEE1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 AL353135.1-201ENST00000606729 504 ntBASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC27.3■■□□□ 1.96
PLEKHD1A6NEE1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 CFL1-212ENST00000531413 636 ntTSL 3 BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
PLEKHD1A6NEE1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC27.28■■□□□ 1.96
PLEKHD1A6NEE1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms