Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 MCCD1P1-208ENST00000445732 328 ntBASIC16.19■□□□□ 0.18
TMEM129A0AVI4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 AC141257.4-201ENST00000634557 245 ntBASIC16.19■□□□□ 0.18
TMEM129A0AVI4 AC136944.6-201ENST00000634818 245 ntBASIC16.19■□□□□ 0.18
TMEM129A0AVI4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 AL163051.1-201ENST00000569214 1512 ntBASIC16.19■□□□□ 0.18
TMEM129A0AVI4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEM129A0AVI4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 AL023284.2-201ENST00000405850 579 ntBASIC16.18■□□□□ 0.18
TMEM129A0AVI4 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 AC117947.1-201ENST00000427448 529 ntBASIC16.18■□□□□ 0.18
TMEM129A0AVI4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 MIR4674-201ENST00000582457 87 ntBASIC16.18■□□□□ 0.18
TMEM129A0AVI4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 AL118508.1-201ENST00000613502 2345 ntBASIC16.18■□□□□ 0.18
TMEM129A0AVI4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM129A0AVI4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 AL512604.3-201ENST00000569583 964 ntBASIC16.17■□□□□ 0.18
TMEM129A0AVI4 AC139887.4-201ENST00000607877 719 ntBASIC16.17■□□□□ 0.18
TMEM129A0AVI4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM129A0AVI4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms