Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AC009065.1-201ENST00000564055 1225 ntBASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AC092329.2-201ENST00000598402 547 ntBASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CLEC4GP1-201ENST00000596555 870 ntBASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.4□□□□□ -0.1
TCRBV4S1A1TA0A5B7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TSPY22P-201ENST00000427496 604 ntBASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 KRT8P26-201ENST00000534154 1276 ntBASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 MIR3652-201ENST00000579335 131 ntBASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 AL096828.2-201ENST00000567259 1965 ntBASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TCRBV4S1A1TA0A5B7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms