Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 AC132938.5-201ENST00000624980 1813 ntBASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 GGTLC5P-201ENST00000617623 998 ntBASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC163A0A0D9SF12 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 IGLL3P-201ENST00000412472 434 ntBASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 RHOQP3-201ENST00000437982 621 ntBASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 AL031432.2-201ENST00000566714 459 ntBASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 AL928711.1-201ENST00000570165 459 ntBASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC163A0A0D9SF12 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 KLF4P1-201ENST00000412782 1185 ntBASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 SPCS2P1-201ENST00000561636 679 ntBASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 AC027612.4-201ENST00000605371 583 ntBASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 AC004877.2-201ENST00000623941 599 ntBASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC163A0A0D9SF12 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CCDC163A0A0D9SF12 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC163A0A0D9SF12 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms