Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 NUDT16P1-203ENST00000513809 620 ntBASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 DUTP2-201ENST00000519164 463 ntBASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AC100803.2-201ENST00000562459 1963 ntBASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AL359736.2-201ENST00000621992 437 ntBASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 FAM197Y4-202ENST00000622692 608 ntBASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AL138688.1-201ENST00000624851 1594 ntBASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 AC133963.1-201ENST00000504166 1679 ntBASIC13.31□□□□□ -0.28
IGKV3D-20A0A0C4DH25 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms