Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL138688.1-201ENST00000624851 1594 ntBASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 AC132938.6-201ENST00000623828 1655 ntBASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 AC116562.2-201ENST00000507042 360 ntBASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV5A0A0B4J249 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 MIR4651-201ENST00000582622 73 ntBASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 AL359736.2-201ENST00000621992 437 ntBASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 CR769767.2-201ENST00000622735 460 ntBASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV5A0A0B4J249 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 KRT8P7-201ENST00000533003 1432 ntBASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms