Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 RASA4DP-201ENST00000460726 1199 ntBASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 AC139887.4-201ENST00000607877 719 ntBASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRGV1A0A0A0MS02 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 AC008764.6-201ENST00000595909 2069 ntBASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 AL441883.1-201ENST00000566170 1045 ntBASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 AC012306.2-201ENST00000609350 630 ntBASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV1A0A0A0MS02 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 FAM8A6P-201ENST00000407496 1135 ntBASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 AC092647.4-201ENST00000457211 535 ntBASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 YBX1P2-201ENST00000489612 999 ntBASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 AC011558.1-201ENST00000623459 338 ntBASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms