Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGC4Q9Y5F7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGC4Q9Y5F7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 VENTXP7-201ENST00000475503 772 ntBASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 AC074051.2-201ENST00000565115 352 ntBASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 AC005336.2-201ENST00000593183 939 ntBASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 Z69720.1-201ENST00000601483 472 ntBASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 KRT18P55-202ENST00000578578 1546 ntBASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGC4Q9Y5F7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 AC246785.2-201ENST00000432512 513 ntBASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 KRT17P6-201ENST00000453795 1220 ntBASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGC4Q9Y5F7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms