Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 HTR7P1-202ENST00000624664 4411 ntBASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 KRT18P31-201ENST00000506277 1292 ntBASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 AC004263.2-201ENST00000617183 678 ntBASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 AC022898.2-201ENST00000616822 1312 ntBASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHB1Q9Y5F3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 LINC00167-201ENST00000530583 1419 ntBASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 AC132938.6-201ENST00000623828 1655 ntBASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 AC018470.1-201ENST00000624790 3129 ntBASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 KRT18P55-202ENST00000578578 1546 ntBASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 AC079776.4-201ENST00000511039 504 ntBASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 AC012615.1-201ENST00000565797 1299 ntBASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHB1Q9Y5F3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB1Q9Y5F3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB1Q9Y5F3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHB1Q9Y5F3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHB1Q9Y5F3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms