Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 AC009078.2-202ENST00000463353 338 ntBASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 VENTXP7-201ENST00000475503 772 ntBASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 GUSBP12-201ENST00000513727 720 ntBASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 AC074051.2-201ENST00000565115 352 ntBASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 PHGDH-209ENST00000641074 1780 ntBASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PCDHB11Q9Y5F2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 IGHGP-201ENST00000390555 1178 ntBASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 AL022342.1-201ENST00000400363 863 ntBASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 AP000347.1-202ENST00000435868 847 ntBASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 AC079776.4-201ENST00000511039 504 ntBASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 AC138894.3-201ENST00000603787 634 ntBASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 GPALPP1-207ENST00000611650 899 ntBASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHB11Q9Y5F2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB11Q9Y5F2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB11Q9Y5F2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms