Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC128676.1-201ENST00000454392 318 ntBASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 AC116562.2-201ENST00000507042 360 ntBASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 RPPH1-201ENST00000516869 333 ntBASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 CD177P1-201ENST00000606252 935 ntBASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
UBE2D4Q9Y2X8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 AC132938.6-201ENST00000623828 1655 ntBASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 HLA-J-201ENST00000462773 1622 ntBASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 AC104390.1-201ENST00000555663 520 ntBASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 TNRC18P3-201ENST00000441896 2691 ntBASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 OR6D1P-203ENST00000641209 4860 ntBASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.48□□□□□ -0.41
UBE2D4Q9Y2X8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 AL135905.2-201ENST00000584934 1404 ntBASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 NUDT16P1-203ENST00000513809 620 ntBASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 WWOX-216ENST00000569818 525 ntBASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms