Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.93■□□□□ 0.3
LHX6Q9UPM6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LHX6Q9UPM6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 AC125437.2-201ENST00000625180 2167 ntBASIC16.92■□□□□ 0.3
LHX6Q9UPM6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 ELL2P1-201ENST00000413990 1906 ntBASIC16.92■□□□□ 0.3
LHX6Q9UPM6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 AL078644.1-201ENST00000609881 752 ntBASIC16.92■□□□□ 0.3
LHX6Q9UPM6 AC107308.1-201ENST00000615897 301 ntBASIC16.92■□□□□ 0.3
LHX6Q9UPM6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 Z92544.3-201ENST00000624747 417 ntBASIC16.92■□□□□ 0.3
LHX6Q9UPM6 AC107918.4-202ENST00000641623 219 ntBASIC16.92■□□□□ 0.3
LHX6Q9UPM6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 AC097374.2-201ENST00000618617 1306 ntBASIC16.92■□□□□ 0.3
LHX6Q9UPM6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LHX6Q9UPM6 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.91■□□□□ 0.3
LHX6Q9UPM6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 MKNK2P1-201ENST00000437526 628 ntBASIC16.91■□□□□ 0.3
LHX6Q9UPM6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.91■□□□□ 0.3
LHX6Q9UPM6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 AC112777.1-201ENST00000540175 1423 ntBASIC16.9■□□□□ 0.3
LHX6Q9UPM6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 KRT18P2-201ENST00000447938 1258 ntBASIC16.9■□□□□ 0.3
LHX6Q9UPM6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms