Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 AL359736.2-201ENST00000621992 437 ntBASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 TMEM191A-211ENST00000637163 1067 ntBASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TMCC3Q9ULS5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 PRORSD1P-201ENST00000295112 541 ntBASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 PKD1P5-201ENST00000532415 10291 ntBASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMCC3Q9ULS5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 MIR3180-4-201ENST00000582223 153 ntBASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 AP001412.1-201ENST00000608405 714 ntBASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 AL355312.1-201ENST00000407115 2176 ntBASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMCC3Q9ULS5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms